US3

1-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-5-methyl-2-selanylpyrimidin-4(1H)-one

Created:2009-06-15
Last modified:  2021-03-01

Help

Find related ligands:

Chemical Details

Formal Charge0
Atom Count36
Chiral Atom Count3
Bond Count37
Aromatic Bond Count0
2D diagram of US3
Toggle HydrogenToggle Labels

Chemical Component Summary

Name1-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-5-methyl-2-selanylpyrimidin-4(1H)-one
Synonyms2-Se-Thymidine-5'-phosphate
Systematic Name (OpenEye OEToolkits)[(2R,3S,5R)-3-hydroxy-5-(5-methyl-4-oxo-2-selanyl-pyrimidin-1-yl)oxolan-2-yl]methyl dihydrogen phosphate
FormulaC10 H15 N2 O7 P Se
Molecular Weight385.169
TypeDNA LINKING

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs11.02O=P(O)(O)OCC2OC(N1C(=NC(=O)C(=C1)C)[SeH])CC2O
SMILESCACTVS3.352CC1=CN([CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2)C(=NC1=O)[SeH]
SMILESOpenEye OEToolkits1.7.0CC1=CN(C(=NC1=O)[SeH])C2CC(C(O2)COP(=O)(O)O)O
Canonical SMILESCACTVS3.352 CC1=CN([C@H]2C[C@H](O)[C@@H](CO[P](O)(O)=O)O2)C(=NC1=O)[SeH]
Canonical SMILESOpenEye OEToolkits1.7.0 CC1=CN(C(=NC1=O)[SeH])[C@H]2C[C@@H]([C@H](O2)COP(=O)(O)O)O
InChIInChI1.03 InChI=1S/C10H15N2O7PSe/c1-5-3-12(10(21)11-9(5)14)8-2-6(13)7(19-8)4-18-20(15,16)17/h3,6-8,13H,2,4H2,1H3,(H,11,14,21)(H2,15,16,17)/t6-,7+,8+/m0/s1
InChIKeyInChI1.03 NJOAZAGHIQNDNL-XLPZGREQSA-N

Related Resource References

Resource NameReference
PubChem 49867805