UBO

beta-D-rhamnopyranose

Created:	2022-08-16
Last modified:	2022-09-21

Find Related PDB Entry
2 entries where UBO is found in a branched oligosaccharide

Find related ligands:

Similar Ligands (Stereospecific) Similar Ligands (including Stereoisomers) Similar Ligands (Quick Screen) Similar Ligands (Substructure Stereospecific) Similar Ligands (Substructure including Stereoisomers)

Chemical Details
Formal Charge	0
Atom Count	23
Chiral Atom Count	5
Bond Count	23
Aromatic Bond Count	0

2D diagram of UBO

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	beta-D-rhamnopyranose
Synonyms	6-deoxy-beta-D-mannopyranose
Systematic Name (OpenEye OEToolkits)	(2~{R},3~{S},4~{S},5~{S},6~{R})-6-methyloxane-2,3,4,5-tetrol
Formula	C₆ H₁₂ O₅
Molecular Weight	164.156
Type	D-SACCHARIDE, BETA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	OC1C(O)C(C)OC(O)C1O
SMILES	CACTVS	3.385	C[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
SMILES	OpenEye OEToolkits	2.0.7	CC1C(C(C(C(O1)O)O)O)O
Canonical SMILES	CACTVS	3.385	C[C@H]1O[C@@H](O)[C@@H](O)[C@@H](O)[C@@H]1O
Canonical SMILES	OpenEye OEToolkits	2.0.7	C[C@@H]1[C@H]([C@@H]([C@@H]([C@@H](O1)O)O)O)O
InChI	InChI	1.06	InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3-,4+,5+,6-/m1/s1
InChIKey	InChI	1.06	SHZGCJCMOBCMKK-RWOPYEJCSA-N

Related Resource References

Resource Name	Reference
PubChem	6992104

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.