U9D

4-deoxy-2,3,6-tri-O-methyl-alpha-D-xylo-hexopyranose

Created:	2020-05-05
Last modified:	2020-07-29

Find Related PDB Entry
1 entries where U9D is found in a branched oligosaccharide

Find related ligands:

Similar Ligands (Stereospecific) Similar Ligands (including Stereoisomers) Similar Ligands (Quick Screen) Similar Ligands (Substructure Stereospecific) Similar Ligands (Substructure including Stereoisomers)

Chemical Details
Formal Charge	0
Atom Count	32
Chiral Atom Count	4
Bond Count	32
Aromatic Bond Count	0

2D diagram of U9D

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	4-deoxy-2,3,6-tri-O-methyl-alpha-D-xylo-hexopyranose
Systematic Name (OpenEye OEToolkits)	(3~{R},4~{S},6~{S})-3,4-dimethoxy-6-(methoxymethyl)oxan-2-ol
Formula	C₉ H₁₈ O₅
Molecular Weight	206.236
Type	D-SACCHARIDE, ALPHA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	C1C(OC(C(C1OC)OC)O)COC
SMILES	CACTVS	3.385	COC[CH]1C[CH](OC)[CH](OC)[CH](O)O1
SMILES	OpenEye OEToolkits	2.0.7	COCC1CC(C(C(O1)O)OC)OC
Canonical SMILES	CACTVS	3.385	COC[C@@H]1C[C@H](OC)[C@@H](OC)[C@@H](O)O1
Canonical SMILES	OpenEye OEToolkits	2.0.7	COC[C@@H]1C[C@@H]([C@H](C(O1)O)OC)OC
InChI	InChI	1.03	InChI=1S/C9H18O5/c1-11-5-6-4-7(12-2)8(13-3)9(10)14-6/h6-10H,4-5H2,1-3H3/t6-,7-,8+,9?/m0/s1
InChIKey	InChI	1.03	VGIKFUPOZBZSKX-VTBDLZGYSA-N

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.