RBD

(R,R)-N6,N6-(2,3-dihydroxy-1,4-butadiyl)-2'-deoxyadenosine-5'-monophosphate

Created:	2014-01-07
Last modified:	2014-05-28

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1 entries where RBD is found in a polymer sequence

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Chemical Details
Formal Charge	0
Atom Count	50
Chiral Atom Count	5
Bond Count	53
Aromatic Bond Count	10

2D diagram of RBD

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Chemical Component Summary
Name	(R,R)-N6,N6-(2,3-dihydroxy-1,4-butadiyl)-2'-deoxyadenosine-5'-monophosphate
Systematic Name (OpenEye OEToolkits)	(3R,4R)-1-[9-[(2R,4S,5R)-4-oxidanyl-5-[[tris(oxidanyl)-$l^{5}-phosphanyl]oxymethyl]oxolan-2-yl]purin-6-yl]pyrrolidine-3,4-diol
Formula	C₁₄ H₂₂ N₅ O₈ P
Molecular Weight	419.327
Type	DNA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	n3c1c(ncnc1N2CC(O)C(O)C2)n(c3)C4OC(C(O)C4)COP(O)(O)O
SMILES	CACTVS	3.385	O[CH]1C[CH](O[CH]1CO[PH](O)(O)O)n2cnc3c(ncnc23)N4C[CH](O)[CH](O)C4
SMILES	OpenEye OEToolkits	1.7.6	c1nc2c(c(n1)N3CC(C(C3)O)O)ncn2C4CC(C(O4)COP(O)(O)O)O
Canonical SMILES	CACTVS	3.385	O[C@H]1C[C@@H](O[C@@H]1CO[PH](O)(O)O)n2cnc3c(ncnc23)N4C[C@@H](O)[C@H](O)C4
Canonical SMILES	OpenEye OEToolkits	1.7.6	c1nc2c(c(n1)N3C[C@H]([C@@H](C3)O)O)ncn2[C@H]4C[C@@H]([C@H](O4)COP(O)(O)O)O
InChI	InChI	1.03	InChI=1S/C14H22N5O8P/c20-7-1-11(27-10(7)4-26-28(23,24)25)19-6-17-12-13(15-5-16-14(12)19)18-2-8(21)9(22)3-18/h5-11,20-25,28H,1-4H2/t7-,8+,9+,10+,11+/m0/s1
InChIKey	InChI	1.03	AFIPVZHEZSDVQA-VPJKUYQRSA-N

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