PRD_002306

Rufomycin I

Created:2018-03-09
Last modified:  2019-06-04

PRD_002306 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 6CN8.

Chemical Details

Formal Charge0
Atom Count152
Chiral Atom Count9
Bond Count156
Aromatic Bond Count16
Toggle HydrogenToggle Labels

Chemical Component Summary

NameRufomycin I
Systematic Name (OpenEye OEToolkits)(2~{S},5~{S},8~{S},11~{S},14~{S},17~{S},20~{S},22~{S})-5-[(~{E})-but-2-enyl]-10,17,19,22-tetramethyl-8-[[1-[(3~{R})-2-methyl-3-oxidanyl-butan-2-yl]indol-3-yl]methyl]-2,11-bis(2-methylpropyl)-14-[(3-nitro-4-oxidanyl-phenyl)methyl]-23-oxidanyl-1,4,7,10,13,16,19-heptazabicyclo[18.3.1]tetracosane-3,6,9,12,15,18,24-heptone
FormulaC54 H77 N9 O12
Molecular Weight1,044.242
TypePEPTIDE-LIKE

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs12.01C(C1NC(C(NC(C(N3C(C(N(C(C(NC(C(NC(C(N(C1=O)C)CC(C)C)=O)Cc2cc(c(cc2)O)[N+]([O-])=O)=O)C)=O)C)CC(C)C3O)=O)CC(C)C)=O)C\C=C\C)=O)c5c4ccccc4n(c5)C(C(C)O)(C)C
SMILESCACTVS3.385CC=CC[CH]1NC(=O)[CH](CC(C)C)[N]2[CH](O)[CH](C)C[CH](N(C)C(=O)[CH](C)NC(=O)[CH](Cc3ccc(O)c(c3)[N+]([O-])=O)NC(=O)[CH](CC(C)C)N(C)C(=O)[CH](Cc4cn(c5ccccc45)C(C)(C)[CH](C)O)NC1=O)C2=O
SMILESOpenEye OEToolkits2.0.7CC=CCC1C(=O)NC(C(=O)N(C(C(=O)NC(C(=O)NC(C(=O)N(C2CC(C(N(C2=O)C(C(=O)N1)CC(C)C)O)C)C)C)Cc3ccc(c(c3)[N+](=O)[O-])O)CC(C)C)C)Cc4cn(c5c4cccc5)C(C)(C)C(C)O
Canonical SMILESCACTVS3.385 C/C=C/C[C@@H]1NC(=O)[C@H](CC(C)C)[N@]2[C@H](O)[C@@H](C)C[C@H](N(C)C(=O)[C@H](C)NC(=O)[C@H](Cc3ccc(O)c(c3)[N+]([O-])=O)NC(=O)[C@H](CC(C)C)N(C)C(=O)[C@H](Cc4cn(c5ccccc45)C(C)(C)[C@@H](C)O)NC1=O)C2=O
Canonical SMILESOpenEye OEToolkits2.0.7 C/C=C/C[C@H]1C(=O)N[C@H](C(=O)N([C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N([C@H]2C[C@@H](C(N(C2=O)[C@H](C(=O)N1)CC(C)C)O)C)C)C)Cc3ccc(c(c3)[N+](=O)[O-])O)CC(C)C)C)Cc4cn(c5c4cccc5)C(C)(C)[C@@H](C)O
InChIInChI1.06 InChI=1S/C54H77N9O12/c1-13-14-18-37-46(66)58-39(27-35-28-61(54(9,10)33(8)64)40-19-16-15-17-36(35)40)52(72)59(11)42(22-29(2)3)48(68)57-38(25-34-20-21-45(65)41(26-34)63(74)75)47(67)55-32(7)51(71)60(12)44-24-31(6)50(70)62(53(44)73)43(23-30(4)5)49(69)56-37/h13-17,19-21,26,28-33,37-39,42-44,50,64-65,70H,18,22-25,27H2,1-12H3,(H,55,67)(H,56,69)(H,57,68)(H,58,66)/b14-13+/t31-,32-,33+,37-,38-,39-,42-,43-,44-,50+/m0/s1
InChIKeyInChI1.06 INOZVACIAGQCKI-JCFPFECDSA-N

Related Resource References

Resource NameReference
PubChem 138393317