M5Q

[(1S)-1-[(2S,3R,4R,5R)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]ethyl] dihydrogen phosphate

Created:	2022-12-15
Last modified:	2025-11-12

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1 entries where M5Q is found in a polymer sequence

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Chemical Details
Formal Charge	0
Atom Count	41
Chiral Atom Count	5
Bond Count	42
Aromatic Bond Count	0

2D diagram of M5Q

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Chemical Component Summary
Name	[(1S)-1-[(2S,3R,4R,5R)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]ethyl] dihydrogen phosphate
Systematic Name (OpenEye OEToolkits)	[(1~{S})-1-[(2~{S},3~{R},4~{R},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]ethyl] dihydrogen phosphate
Formula	C₁₁ H₁₈ N₃ O₈ P
Molecular Weight	351.25
Type	RNA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	CACTVS	3.385	CO[CH]1[CH](O)[CH](O[CH]1N2C=CC(=NC2=O)N)[CH](C)O[P](O)(O)=O
SMILES	OpenEye OEToolkits	2.0.7	CC(C1C(C(C(O1)N2C=CC(=NC2=O)N)OC)O)OP(=O)(O)O
Canonical SMILES	CACTVS	3.385	CO[C@@H]1[C@H](O)[C@H](O[C@H]1N2C=CC(=NC2=O)N)[C@H](C)O[P](O)(O)=O
Canonical SMILES	OpenEye OEToolkits	2.0.7	C[C@@H]([C@@H]1[C@H]([C@H]([C@@H](O1)N2C=CC(=NC2=O)N)OC)O)OP(=O)(O)O
InChI	InChI	1.06	InChI=1S/C11H18N3O8P/c1-5(22-23(17,18)19)8-7(15)9(20-2)10(21-8)14-4-3-6(12)13-11(14)16/h3-5,7-10,15H,1-2H3,(H2,12,13,16)(H2,17,18,19)/t5-,7+,8+,9+,10+/m0/s1
InChIKey	InChI	1.06	OBLDPPWBFVCFRR-BOHATCBPSA-N

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