KDB

3,4,5-trideoxy-alpha-D-erythro-oct-3-en-2-ulopyranosonic acid

Created:	2008-01-04
Last modified:	2020-07-17

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2 entries where KDB is found in a branched oligosaccharide

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Chemical Details
Formal Charge	0
Atom Count	26
Chiral Atom Count	3
Bond Count	26
Aromatic Bond Count	0

2D diagram of KDB

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Chemical Component Summary
Name	3,4,5-trideoxy-alpha-D-erythro-oct-3-en-2-ulopyranosonic acid
Synonyms	3,4-dehydro-3,4,5-trideoxy-alpha-D-manno-oct-2-ulosonic acid; 3,4,5-trideoxy-alpha-D-erythro-oct-3-en-2-ulosonic acid; 3,4,5-trideoxy-D-erythro-oct-3-en-2-ulosonic acid; 3,4,5-trideoxy-erythro-oct-3-en-2-ulosonic acid
Systematic Name (OpenEye OEToolkits)	(2~{S},6~{R})-2-[(1~{R})-1,2-bis(oxidanyl)ethyl]-6-oxidanyl-2,3-dihydropyran-6-carboxylic acid
Formula	C₈ H₁₂ O₆
Molecular Weight	204.177
Type	D-SACCHARIDE, ALPHA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	OC1(C(=O)O)C=CCC(C(CO)O)O1
SMILES	CACTVS	3.385	OC[CH](O)[CH]1CC=C[C](O)(O1)C(O)=O
SMILES	OpenEye OEToolkits	2.0.7	C1C=CC(OC1C(CO)O)(C(=O)O)O
Canonical SMILES	CACTVS	3.385	OC[C@@H](O)[C@@H]1CC=C[C@@](O)(O1)C(O)=O
Canonical SMILES	OpenEye OEToolkits	2.0.7	C1C=C[C@@](O[C@@H]1[C@@H](CO)O)(C(=O)O)O
InChI	InChI	1.03	InChI=1S/C8H12O6/c9-4-5(10)6-2-1-3-8(13,14-6)7(11)12/h1,3,5-6,9-10,13H,2,4H2,(H,11,12)/t5-,6+,8-/m1/s1
InChIKey	InChI	1.03	ITFIFEKDEVIBCW-GKROBHDKSA-N

Related Resource References

Resource Name	Reference
PubChem	25113105

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.