J0X

2-[[2-oxidanylidene-1-[(2R,4S,5R)-4-oxidanyl-5-(phosphonooxymethyl)oxolan-2-yl]pyrimidin-4-yl]amino]ethanoic acid

Created:	2021-03-17
Last modified:	2022-03-09

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1 entries where J0X is found in a polymer sequence

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Chemical Details
Formal Charge	0
Atom Count	40
Chiral Atom Count	3
Bond Count	41
Aromatic Bond Count	0

2D diagram of J0X

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Chemical Component Summary
Name	2-[[2-oxidanylidene-1-[(2R,4S,5R)-4-oxidanyl-5-(phosphonooxymethyl)oxolan-2-yl]pyrimidin-4-yl]amino]ethanoic acid
Systematic Name (OpenEye OEToolkits)	2-[[2-oxidanylidene-1-[(2~{R},4~{S},5~{R})-4-oxidanyl-5-(phosphonooxymethyl)oxolan-2-yl]pyrimidin-4-yl]amino]ethanoic acid
Formula	C₁₁ H₁₆ N₃ O₉ P
Molecular Weight	365.233
Type	DNA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	CACTVS	3.385	O[CH]1C[CH](O[CH]1CO[P](O)(O)=O)N2C=CC(=NC2=O)NCC(O)=O
SMILES	OpenEye OEToolkits	2.0.7	C1C(C(OC1N2C=CC(=NC2=O)NCC(=O)O)COP(=O)(O)O)O
Canonical SMILES	CACTVS	3.385	O[C@H]1C[C@@H](O[C@@H]1CO[P](O)(O)=O)N2C=CC(=NC2=O)NCC(O)=O
Canonical SMILES	OpenEye OEToolkits	2.0.7	C1[C@@H]([C@H](O[C@H]1N2C=CC(=NC2=O)NCC(=O)O)COP(=O)(O)O)O
InChI	InChI	1.03	InChI=1S/C11H16N3O9P/c15-6-3-9(23-7(6)5-22-24(19,20)21)14-2-1-8(13-11(14)18)12-4-10(16)17/h1-2,6-7,9,15H,3-5H2,(H,16,17)(H,12,13,18)(H2,19,20,21)/t6-,7+,9+/m0/s1
InChIKey	InChI	1.03	QYPVHBKFTXARRD-LKEWCRSYSA-N

Related Resource References

Resource Name	Reference
PubChem	162677691

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.