D6D

(1S,2S,3S,4R,5R)-2-amino-4-[(2S)-2-(hydroxymethyl)pyrrolidin-1-yl]-6,8-dioxabicyclo[3.2.1]octan-3-ol

Created:	2017-10-20
Last modified:	2020-04-22

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1 entries where D6D is found as a standalone ligand

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Chemical Details
Formal Charge	0
Atom Count	37
Chiral Atom Count	6
Bond Count	39
Aromatic Bond Count	0

2D diagram of D6D

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Chemical Component Summary
Name	(1S,2S,3S,4R,5R)-2-amino-4-[(2S)-2-(hydroxymethyl)pyrrolidin-1-yl]-6,8-dioxabicyclo[3.2.1]octan-3-ol
Systematic Name (OpenEye OEToolkits)	(1~{S},2~{S},3~{S},4~{R},5~{R})-2-azanyl-4-[(2~{S})-2-(hydroxymethyl)pyrrolidin-1-yl]-6,8-dioxabicyclo[3.2.1]octan-3-ol
Formula	C₁₁ H₂₀ N₂ O₄
Molecular Weight	244.287
Type	NON-POLYMER

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	OCC3CCCN3C1C2OCC(C(C1O)N)O2
SMILES	CACTVS	3.385	N[CH]1[CH](O)[CH]([CH]2OC[CH]1O2)N3CCC[CH]3CO
SMILES	OpenEye OEToolkits	2.0.6	C1CC(N(C1)C2C(C(C3COC2O3)N)O)CO
Canonical SMILES	CACTVS	3.385	N[C@H]1[C@H](O)[C@H]([C@@H]2OC[C@H]1O2)N3CCC[C@H]3CO
Canonical SMILES	OpenEye OEToolkits	2.0.6	C1C[C@H](N(C1)[C@@H]2[C@H]([C@@H]([C@H]3CO[C@@H]2O3)N)O)CO
InChI	InChI	1.03	InChI=1S/C11H20N2O4/c12-8-7-5-16-11(17-7)9(10(8)15)13-3-1-2-6(13)4-14/h6-11,14-15H,1-5,12H2/t6-,7+,8+,9+,10-,11+/m0/s1
InChIKey	InChI	1.03	NMTUCAAUKBQRDV-ZESFFYIMSA-N

Related Resource References

Resource Name	Reference
PubChem	77059014

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.