C42

3'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE

Created:	1998-01-28
Last modified:	2011-06-04

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18 entries where C42 is found in a polymer sequence

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Chemical Details
Formal Charge	0
Atom Count	35
Chiral Atom Count	3
Bond Count	36
Aromatic Bond Count	0

2D diagram of C42

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Chemical Component Summary
Name	3'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
Systematic Name (OpenEye OEToolkits)	[(2S,3S,5R)-3-amino-5-(4-amino-2-oxo-pyrimidin-1-yl)oxolan-2-yl]methyl dihydrogen phosphate
Formula	C₉ H₁₅ N₄ O₆ P
Molecular Weight	306.212
Type	DNA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	O=C1N=C(N)C=CN1C2OC(C(N)C2)COP(=O)(O)O
SMILES	CACTVS	3.341	N[CH]1C[CH](O[CH]1CO[P](O)(O)=O)N2C=CC(=NC2=O)N
SMILES	OpenEye OEToolkits	1.5.0	C1C(C(OC1N2C=CC(=NC2=O)N)COP(=O)(O)O)N
Canonical SMILES	CACTVS	3.341	N[C@H]1C[C@@H](O[C@@H]1CO[P](O)(O)=O)N2C=CC(=NC2=O)N
Canonical SMILES	OpenEye OEToolkits	1.5.0	C1[C@@H]([C@H](O[C@H]1N2C=CC(=NC2=O)N)COP(=O)(O)O)N
InChI	InChI	1.03	InChI=1S/C9H15N4O6P/c10-5-3-8(13-2-1-7(11)12-9(13)14)19-6(5)4-18-20(15,16)17/h1-2,5-6,8H,3-4,10H2,(H2,11,12,14)(H2,15,16,17)/t5-,6+,8+/m0/s1
InChIKey	InChI	1.03	DLMWQJIDSZFHEV-SHYZEUOFSA-N

Related Resource References

Resource Name	Reference
PubChem	49866749

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.