A1L4U

methyl 2-[1-[(2~{R},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-4-oxidanylidene-pyrimidin-5-yl]ethanoate

Created:	2024-10-09
Last modified:	2026-03-11

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2 entries where A1L4U is found in a polymer sequence

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Chemical Details
Formal Charge	0
Atom Count	42
Chiral Atom Count	4
Bond Count	43
Aromatic Bond Count	0

2D diagram of A1L4U

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Chemical Component Summary
Name	methyl 2-[1-[(2~{R},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-4-oxidanylidene-pyrimidin-5-yl]ethanoate
Synonyms	5-methoxycarbonylmethyl-2-deoxouridine
Systematic Name (OpenEye OEToolkits)	methyl 2-[1-[(2~{R},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-4-oxidanylidene-pyrimidin-5-yl]ethanoate
Formula	C₁₂ H₁₇ N₂ O₁₀ P
Molecular Weight	380.245
Type	RNA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	CACTVS	3.385	COC(=O)CC1=CN(C=NC1=O)[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O
SMILES	OpenEye OEToolkits	2.0.7	COC(=O)CC1=CN(C=NC1=O)C2C(C(C(O2)COP(=O)(O)O)O)O
Canonical SMILES	CACTVS	3.385	COC(=O)CC1=CN(C=NC1=O)[C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]2O
Canonical SMILES	OpenEye OEToolkits	2.0.7	COC(=O)CC1=CN(C=NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O
InChI	InChI	1.06	InChI=1S/C12H17N2O10P/c1-22-8(15)2-6-3-14(5-13-11(6)18)12-10(17)9(16)7(24-12)4-23-25(19,20)21/h3,5,7,9-10,12,16-17H,2,4H2,1H3,(H2,19,20,21)
InChIKey	InChI	1.06	FCZFXJJAOVKHCD-UHFFFAOYSA-N

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