A1JR4

~{N}-[1-[4-[[(3~{a}~{S},6~{a}~{R})-3,3~{a},4,5,6,6~{a}-hexahydro-1~{H}-cyclopenta[c]pyrrol-2-yl]methyl]phenyl]piperidin-4-yl]-4-oxidanylidene-pyrido[1,2-a]pyrimidine-2-carboxamide

Created:	2025-10-14
Last modified:	2026-11-04

Find Related PDB Entry
1 entries where A1JR4 is found as a standalone ligand

Find related ligands: Help
Similar Ligands (Stereospecific) Similar Ligands (including Stereoisomers) Similar Ligands (Quick Screen) Similar Ligands (Substructure Stereospecific) Similar Ligands (Substructure including Stereoisomers)

Chemical Details
Formal Charge	0
Atom Count	68
Chiral Atom Count	2
Bond Count	73
Aromatic Bond Count	6

2D diagram of A1JR4

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	~{N}-[1-[4-[[(3~{a}~{S},6~{a}~{R})-3,3~{a},4,5,6,6~{a}-hexahydro-1~{H}-cyclopenta[c]pyrrol-2-yl]methyl]phenyl]piperidin-4-yl]-4-oxidanylidene-pyrido[1,2-a]pyrimidine-2-carboxamide
Systematic Name (OpenEye OEToolkits)	~{N}-[1-[4-[[(3~{a}~{S},6~{a}~{R})-3,3~{a},4,5,6,6~{a}-hexahydro-1~{H}-cyclopenta[c]pyrrol-2-yl]methyl]phenyl]piperidin-4-yl]-4-oxidanylidene-pyrido[1,2-a]pyrimidine-2-carboxamide
Formula	C₂₈ H₃₃ N₅ O₂
Molecular Weight	471.594
Type	NON-POLYMER

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	CACTVS	3.385	O=C(NC1CCN(CC1)c2ccc(CN3C[CH]4CCC[CH]4C3)cc2)C5=CC(=O)N6C=CC=CC6=N5
SMILES	OpenEye OEToolkits	2.0.7	c1cc(ccc1CN2CC3CCCC3C2)N4CCC(CC4)NC(=O)C5=CC(=O)N6C=CC=CC6=N5
Canonical SMILES	CACTVS	3.385	O=C(NC1CCN(CC1)c2ccc(CN3C[C@@H]4CCC[C@@H]4C3)cc2)C5=CC(=O)N6C=CC=CC6=N5
Canonical SMILES	OpenEye OEToolkits	2.0.7	c1cc(ccc1CN2C[C@H]3CCC[C@H]3C2)N4CCC(CC4)NC(=O)C5=CC(=O)N6C=CC=CC6=N5
InChI	InChI	1.06	InChI=1S/C28H33N5O2/c34-27-16-25(30-26-6-1-2-13-33(26)27)28(35)29-23-11-14-32(15-12-23)24-9-7-20(8-10-24)17-31-18-21-4-3-5-22(21)19-31/h1-2,6-10,13,16,21-23H,3-5,11-12,14-15,17-19H2,(H,29,35)/t21-,22+
InChIKey	InChI	1.06	YGUNIAYCWXEUIF-SZPZYZBQSA-N