A1IY6

Se-2,6-diaminopurinribosyl-selenohomocysteineamide

Created:	2025-01-22
Last modified:	2025-02-07

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1 entries where A1IY6 is found as a standalone ligand

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Chemical Details
Formal Charge	0
Atom Count	49
Chiral Atom Count	5
Bond Count	51
Aromatic Bond Count	10

2D diagram of A1IY6

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Chemical Component Summary
Name	Se-2,6-diaminopurinribosyl-selenohomocysteineamide
Synonyms	(2S)-2-azanyl-4-[[(2S,3S,4R,5R)-5-[2,6-bis(azanyl)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylselanyl]butanamide; SeDHA
Systematic Name (OpenEye OEToolkits)	(2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-[2,6-bis(azanyl)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylselanyl]butanamide
Formula	C₁₄ H₂₂ N₈ O₄ Se
Molecular Weight	445.336
Type	RNA OH 3 PRIME TERMINUS

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	CACTVS	3.385	N[CH](CC[Se]C[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)nc(N)nc23)C(N)=O
SMILES	OpenEye OEToolkits	2.0.7	c1nc2c(nc(nc2n1C3C(C(C(O3)C[Se]CCC(C(=O)N)N)O)O)N)N
Canonical SMILES	CACTVS	3.385	N[C@@H](CC[Se]C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)nc(N)nc23)C(N)=O
Canonical SMILES	OpenEye OEToolkits	2.0.7	c1nc2c(nc(nc2n1[C@H]3[C@@H]([C@@H]([C@H](O3)C[Se]CC[C@@H](C(=O)N)N)O)O)N)N
InChI	InChI	1.06	InChI=1S/C14H22N8O4Se/c15-5(11(17)25)1-2-27-3-6-8(23)9(24)13(26-6)22-4-19-7-10(16)20-14(18)21-12(7)22/h4-6,8-9,13,23-24H,1-3,15H2,(H2,17,25)(H4,16,18,20,21)/t5-,6+,8+,9+,13+/m0/s1
InChIKey	InChI	1.06	MSXIHLRPNLBPQD-YTMOPEAISA-N

Related Resource References

Resource Name	Reference
PubChem	172651739

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.