A1I3W

4-[4-[4-[[(6S,6aS)-2-methoxy-6-oxidanyl-11-oxidanylidene-5,6,6a,7,8,9-hexahydropyrrolo[2,1-c][1,4]benzodiazepin-3-yl]oxy]butanoylamino]phenyl]-1-methyl-N-[4-(4-methylpiperazin-1-yl)phenyl]pyrrole-2-carboxamide

Created:	2025-02-18
Last modified:	2026-03-04

Find Related PDB Entry
1 entries where A1I3W is found as a standalone ligand

Find related ligands:

Similar Ligands (Stereospecific) Similar Ligands (including Stereoisomers) Similar Ligands (Quick Screen) Similar Ligands (Substructure Stereospecific) Similar Ligands (Substructure including Stereoisomers)

Chemical Details
Formal Charge	0
Atom Count	100
Chiral Atom Count	2
Bond Count	106
Aromatic Bond Count	23

2D diagram of A1I3W

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	4-[4-[4-[[(6S,6aS)-2-methoxy-6-oxidanyl-11-oxidanylidene-5,6,6a,7,8,9-hexahydropyrrolo[2,1-c][1,4]benzodiazepin-3-yl]oxy]butanoylamino]phenyl]-1-methyl-N-[4-(4-methylpiperazin-1-yl)phenyl]pyrrole-2-carboxamide
Systematic Name (OpenEye OEToolkits)	4-[4-[4-[[(6~{S},6~{a}~{S})-2-methoxy-6-oxidanyl-11-oxidanylidene-5,6,6~{a},7,8,9-hexahydropyrrolo[2,1-c][1,4]benzodiazepin-3-yl]oxy]butanoylamino]phenyl]-1-methyl-~{N}-[4-(4-methylpiperazin-1-yl)phenyl]pyrrole-2-carboxamide
Formula	C₄₀ H₄₇ N₇ O₆
Molecular Weight	721.844
Type	NON-POLYMER

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	CACTVS	3.385	COc1cc2C(=O)N3CCC[CH]3[CH](O)Nc2cc1OCCCC(=O)Nc4ccc(cc4)c5cn(C)c(c5)C(=O)Nc6ccc(cc6)N7CCN(C)CC7
SMILES	OpenEye OEToolkits	2.0.7	Cn1cc(cc1C(=O)Nc2ccc(cc2)N3CCN(CC3)C)c4ccc(cc4)NC(=O)CCCOc5cc6c(cc5OC)C(=O)N7CCCC7C(N6)O
Canonical SMILES	CACTVS	3.385	COc1cc2C(=O)N3CCC[C@H]3[C@H](O)Nc2cc1OCCCC(=O)Nc4ccc(cc4)c5cn(C)c(c5)C(=O)Nc6ccc(cc6)N7CCN(C)CC7
Canonical SMILES	OpenEye OEToolkits	2.0.7	Cn1cc(cc1C(=O)Nc2ccc(cc2)N3CCN(CC3)C)c4ccc(cc4)NC(=O)CCCOc5cc6c(cc5OC)C(=O)N7CCC[C@H]7[C@@H](N6)O
InChI	InChI	1.06	InChI=1S/C40H47N7O6/c1-44-17-19-46(20-18-44)30-14-12-29(13-15-30)42-39(50)34-22-27(25-45(34)2)26-8-10-28(11-9-26)41-37(48)7-5-21-53-36-24-32-31(23-35(36)52-3)40(51)47-16-4-6-33(47)38(49)43-32/h8-15,22-25,33,38,43,49H,4-7,16-21H2,1-3H3,(H,41,48)(H,42,50)/t33-,38-/m0/s1
InChIKey	InChI	1.06	FFFKAOLHZVTKGH-BAOFOTJISA-N

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.