A1C9H

1-[(2R,3R,4S,5R)-5-({[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-3,4-dihydroxyoxolan-2-yl]-4-[(6P)-7-{[2-(dimethylamino)ethyl]amino}-6-(5-fluoro-1H-indol-2-yl)-1-methyl-1H-imidazo[4,5-c]pyridin-2-yl]pyridin-1-ium (non-preferred name)

Created:2026-02-27
Last modified:  2026-04-22

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Chemical Details

Formal Charge1
Atom Count113
Chiral Atom Count8
Bond Count121
Aromatic Bond Count36
2D diagram of A1C9H
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Chemical Component Summary

Name1-[(2R,3R,4S,5R)-5-({[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-3,4-dihydroxyoxolan-2-yl]-4-[(6P)-7-{[2-(dimethylamino)ethyl]amino}-6-(5-fluoro-1H-indol-2-yl)-1-methyl-1H-imidazo[4,5-c]pyridin-2-yl]pyridin-1-ium (non-preferred name)
Systematic Name (OpenEye OEToolkits)[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-[4-[7-[2-(dimethylamino)ethylamino]-6-(5-fluoranyl-1~{H}-indol-2-yl)-1-methyl-imidazo[4,5-c]pyridin-2-yl]pyridin-1-ium-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
FormulaC39 H46 F N12 O13 P2
Molecular Weight971.801
TypeNON-POLYMER

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs14.52Fc1cc2cc([NH]c2cc1)c1ncc2nc(n(C)c2c1NCCN(C)C)c1cc[n+](cc1)C1OC(COP(=O)(O)OP(=O)(O)OCC2OC(n3cnc4c(N)ncnc43)C(O)C2O)C(O)C1O
SMILESCACTVS3.385CN(C)CCNc1c(ncc2nc(n(C)c12)c3cc[n+](cc3)[CH]4O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]5O[CH]([CH](O)[CH]5O)n6cnc7c(N)ncnc67)[CH](O)[CH]4O)c8[nH]c9ccc(F)cc9c8
SMILESOpenEye OEToolkits3.1.0.0Cn1c2c(cnc(c2NCCN(C)C)c3cc4cc(ccc4[nH]3)F)nc1c5cc[n+](cc5)C6C(C(C(O6)COP(=O)(O)OP(=O)(O)OCC7C(C(C(O7)n8cnc9c8ncnc9N)O)O)O)O
Canonical SMILESCACTVS3.385 CN(C)CCNc1c(ncc2nc(n(C)c12)c3cc[n+](cc3)[C@@H]4O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]5O[C@H]([C@H](O)[C@@H]5O)n6cnc7c(N)ncnc67)[C@@H](O)[C@H]4O)c8[nH]c9ccc(F)cc9c8
Canonical SMILESOpenEye OEToolkits3.1.0.0 Cn1c2c(cnc(c2NCCN(C)C)c3cc4cc(ccc4[nH]3)F)nc1c5cc[n+](cc5)[C@H]6[C@@H]([C@@H]([C@H](O6)COP(=O)(O)OP(=O)(O)OC[C@@H]7[C@H]([C@H]([C@@H](O7)n8cnc9c8ncnc9N)O)O)O)O
InChIInChI1.06 InChI=1S/C39H45FN12O13P2/c1-49(2)11-8-42-28-27(23-13-20-12-21(40)4-5-22(20)47-23)43-14-24-30(28)50(3)36(48-24)19-6-9-51(10-7-19)38-33(55)31(53)25(63-38)15-61-66(57,58)65-67(59,60)62-16-26-32(54)34(56)39(64-26)52-18-46-29-35(41)44-17-45-37(29)52/h4-7,9-10,12-14,17-18,25-26,31-34,38-39,53-56H,8,11,15-16H2,1-3H3,(H5,41,42,44,45,48,57,58,59,60)/p+1/t25-,26-,31-,32-,33-,34-,38-,39-/m1/s1
InChIKeyInChI1.06 KSVLOXJVHDPYBQ-NHFFGGENSA-O