A1C9F

5'-O-({4-[(5-{4-[(5-aminopentyl)(hydroxy)amino]-4-oxobutanamido}pentyl)(hydroxy)amino]-4-oxobutanoyl}sulfamoyl)adenosine

Created:	2026-02-27
Last modified:	2026-08-26

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1 entries where A1C9F is found as a standalone ligand

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Chemical Details
Formal Charge	0
Atom Count	97
Chiral Atom Count	4
Bond Count	99
Aromatic Bond Count	10

2D diagram of A1C9F

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Chemical Component Summary
Name	5'-O-({4-[(5-{4-[(5-aminopentyl)(hydroxy)amino]-4-oxobutanamido}pentyl)(hydroxy)amino]-4-oxobutanoyl}sulfamoyl)adenosine
Systematic Name (OpenEye OEToolkits)	[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[4-[5-[[4-[5-azanylpentyl(oxidanyl)amino]-4-oxidanylidene-butanoyl]amino]pentyl-oxidanyl-amino]-4-oxidanylidene-butanoyl]sulfamate
Formula	C₂₈ H₄₆ N₁₀ O₁₂ S
Molecular Weight	746.79
Type	NON-POLYMER

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	14.52	NCCCCCN(O)C(=O)CCC(=O)NCCCCCN(O)C(=O)CCC(=O)NS(=O)(=O)OCC1OC(n2cnc3c(N)ncnc32)C(O)C1O
SMILES	CACTVS	3.385	NCCCCCN(O)C(=O)CCC(=O)NCCCCCN(O)C(=O)CCC(=O)N[S](=O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23
SMILES	OpenEye OEToolkits	3.1.0.0	c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COS(=O)(=O)NC(=O)CCC(=O)N(CCCCCNC(=O)CCC(=O)N(CCCCCN)O)O)O)O)N
Canonical SMILES	CACTVS	3.385	NCCCCCN(O)C(=O)CCC(=O)NCCCCCN(O)C(=O)CCC(=O)N[S](=O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23
Canonical SMILES	OpenEye OEToolkits	3.1.0.0	c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COS(=O)(=O)NC(=O)CCC(=O)N(CCCCCNC(=O)CCC(=O)N(CCCCCN)O)O)O)O)N
InChI	InChI	1.06	InChI=1S/C28H46N10O12S/c29-11-3-1-5-13-37(45)21(41)9-7-19(39)31-12-4-2-6-14-38(46)22(42)10-8-20(40)35-51(47,48)49-15-18-24(43)25(44)28(50-18)36-17-34-23-26(30)32-16-33-27(23)36/h16-18,24-25,28,43-46H,1-15,29H2,(H,31,39)(H,35,40)(H2,30,32,33)/t18-,24-,25-,28-/m1/s1
InChIKey	InChI	1.06	DTAWWDRDFOIVCY-JYQADIQDSA-N

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.