A1C96

1-(5-O-{3-[(3R,4R,5R)-3,4-dihydroxy-5-(hydroxymethyl)piperidin-1-yl]propyl}-alpha-L-lyxofuranosyl)pyrimidine-2,4(1H,3H)-dione

Created:	2026-03-08
Last modified:	2026-07-08

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1 entries where A1C96 is found as a standalone ligand

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Chemical Details
Formal Charge	0
Atom Count	59
Chiral Atom Count	7
Bond Count	61
Aromatic Bond Count	0

2D diagram of A1C96

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Chemical Component Summary
Name	1-(5-O-{3-[(3R,4R,5R)-3,4-dihydroxy-5-(hydroxymethyl)piperidin-1-yl]propyl}-alpha-L-lyxofuranosyl)pyrimidine-2,4(1H,3H)-dione
Systematic Name (OpenEye OEToolkits)	1-[(2~{R},3~{R},4~{S},5~{S})-5-[3-[(3~{R},4~{R},5~{R})-3-(hydroxymethyl)-4,5-bis(oxidanyl)piperidin-1-yl]propoxymethyl]-3,4-bis(oxidanyl)oxolan-2-yl]pyrimidine-2,4-dione
Formula	C₁₈ H₂₉ N₃ O₉
Molecular Weight	431.438
Type	NON-POLYMER

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	14.52	OCC1CN(CC(O)C1O)CCCOCC1OC(N2C=CC(=O)NC2=O)C(O)C1O
SMILES	CACTVS	3.385	OC[CH]1CN(CCCOC[CH]2O[CH]([CH](O)[CH]2O)N3C=CC(=O)NC3=O)C[CH](O)[CH]1O
SMILES	OpenEye OEToolkits	3.1.0.0	C1C(C(C(CN1CCCOCC2C(C(C(O2)N3C=CC(=O)NC3=O)O)O)O)O)CO
Canonical SMILES	CACTVS	3.385	OC[C@H]1CN(CCCOC[C@@H]2O[C@H]([C@H](O)[C@@H]2O)N3C=CC(=O)NC3=O)C[C@@H](O)[C@@H]1O
Canonical SMILES	OpenEye OEToolkits	3.1.0.0	C1[C@@H]([C@H]([C@@H](CN1CCCOC[C@H]2[C@H]([C@H]([C@@H](O2)N3C=CC(=O)NC3=O)O)O)O)O)CO
InChI	InChI	1.06	InChI=1S/C18H29N3O9/c22-8-10-6-20(7-11(23)14(10)25)3-1-5-29-9-12-15(26)16(27)17(30-12)21-4-2-13(24)19-18(21)28/h2,4,10-12,14-17,22-23,25-27H,1,3,5-9H2,(H,19,24,28)/t10-,11-,12+,14-,15-,16-,17-/m1/s1
InChIKey	InChI	1.06	MGEPCFPYOIJOCC-VBVLKBEGSA-N

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.