6NW

2'-O-methyl-5'-O-thiophosphonoadenosine

Created:	2016-05-11
Last modified:	2016-07-20

Find Related PDB Entry
3 entries where 6NW is found in a polymer sequence

Find related ligands:

Similar Ligands (Stereospecific) Similar Ligands (including Stereoisomers) Similar Ligands (Quick Screen) Similar Ligands (Substructure Stereospecific) Similar Ligands (Substructure including Stereoisomers)

Chemical Details
Formal Charge	0
Atom Count	40
Chiral Atom Count	4
Bond Count	42
Aromatic Bond Count	10

2D diagram of 6NW

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	2'-O-methyl-5'-O-thiophosphonoadenosine
Systematic Name (OpenEye OEToolkits)	[(2~{R},3~{R},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]methoxy-sulfanyl-phosphinic acid
Formula	C₁₁ H₁₆ N₅ O₆ P S
Molecular Weight	377.313
Type	RNA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	P(S)(=O)(OCC1OC(C(C1O)OC)n2cnc3c(N)ncnc23)O
SMILES	CACTVS	3.385	CO[CH]1[CH](O)[CH](CO[P](O)(S)=O)O[CH]1n2cnc3c(N)ncnc23
SMILES	OpenEye OEToolkits	2.0.4	COC1C(C(OC1n2cnc3c2ncnc3N)COP(=O)(O)S)O
Canonical SMILES	CACTVS	3.385	CO[C@@H]1[C@H](O)[C@@H](CO[P](O)(S)=O)O[C@H]1n2cnc3c(N)ncnc23
Canonical SMILES	OpenEye OEToolkits	2.0.4	CO[C@@H]1[C@@H]([C@H](O[C@H]1n2cnc3c2ncnc3N)COP(=O)(O)S)O
InChI	InChI	1.03	InChI=1S/C11H16N5O6PS/c1-20-8-7(17)5(2-21-23(18,19)24)22-11(8)16-4-15-6-9(12)13-3-14-10(6)16/h3-5,7-8,11,17H,2H2,1H3,(H2,12,13,14)(H2,18,19,24)/t5-,7-,8-,11-/m1/s1
InChIKey	InChI	1.03	OXNLMRLCWQEYRW-IOSLPCCCSA-N

Related Resource References

Resource Name	Reference
PubChem	16038696, 137348498

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.