SPD: SPERMIDINE
SPD is a Ligand Of Interest in 9VYL designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 9VYL_SPD_A_303 | 99% | 14% | 0.045 | 0.984 | 1.05 | 2.63 | 1 | 3 | 2 | 0 | 100% | 1 |
| 9VYL_SPD_C_303 | 98% | 15% | 0.045 | 0.979 | 0.92 | 2.67 | - | 3 | 2 | 0 | 100% | 1 |
| 9VYL_SPD_C_302 | 98% | 63% | 0.049 | 0.98 | 0.47 | 0.77 | - | - | 2 | 0 | 100% | 1 |
| 9VYL_SPD_A_302 | 98% | 66% | 0.053 | 0.981 | 0.46 | 0.69 | - | - | 1 | 0 | 100% | 1 |
| 9VYL_SPD_B_303 | 97% | 16% | 0.049 | 0.976 | 0.98 | 2.55 | 1 | 3 | 2 | 0 | 100% | 1 |
| 9VYL_SPD_B_302 | 97% | 65% | 0.052 | 0.978 | 0.46 | 0.71 | - | - | 1 | 0 | 100% | 1 |
| 9VYL_SPD_D_302 | 97% | 69% | 0.054 | 0.977 | 0.46 | 0.59 | - | - | 1 | 0 | 100% | 1 |
| 9VYL_SPD_D_303 | 96% | 5% | 0.059 | 0.978 | 1.66 | 3.35 | 1 | 3 | 2 | 0 | 100% | 1 |
| 3C6K_SPD_A_501 | 100% | 52% | 0.031 | 0.993 | 0.37 | 1.31 | - | 1 | 1 | 0 | 100% | 1 |
| 7CI1_SPD_A_401 | 99% | 48% | 0.04 | 0.993 | 0.7 | 1.17 | - | - | 1 | 0 | 100% | 1 |
| 2O07_SPD_B_601 | 99% | 62% | 0.036 | 0.987 | 0.4 | 0.88 | - | - | 1 | 0 | 100% | 1 |
| 7OYW_SPD_B_401 | 99% | 57% | 0.036 | 0.987 | 0.47 | 1.01 | - | 1 | 0 | 0 | 100% | 0.5 |
| 3ICE_SPD_G_101 | 99% | 66% | 0.049 | 0.99 | 0.62 | 0.53 | - | - | 5 | 0 | 100% | 1 |