Ligand validation:9VPS

MLI: MALONATE ION

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
9VPS_MLI_C_402	66%	38%	0.123	0.929	1.34	1	-	-	0	0	100%	1
9VPS_MLI_D_402	63%	38%	0.11	0.904	1.35	0.99	-	-	0	0	100%	1
9VPS_MLI_A_402	61%	37%	0.112	0.902	1.35	1.04	-	-	0	0	100%	1
9VPS_MLI_B_402	47%	38%	0.13	0.867	1.38	0.98	-	-	0	0	100%	1
9VPS_MLI_B_403	44%	38%	0.151	0.878	1.33	1.02	-	-	0	0	100%	1
9VPS_MLI_C_403	40%	37%	0.141	0.85	1.38	1.02	-	-	0	0	100%	1
9VPS_MLI_A_404	36%	38%	0.129	0.822	1.35	1	-	-	0	0	100%	1
9VPS_MLI_D_404	33%	38%	0.13	0.808	1.32	1.02	-	-	0	0	100%	1
9VPS_MLI_C_407	31%	38%	0.162	0.834	1.35	0.99	-	-	0	0	100%	1
9VPS_MLI_B_405	26%	37%	0.159	0.8	1.38	1	-	-	0	0	100%	1
9VPS_MLI_C_405	12%	40%	0.175	0.713	1.25	1.01	-	-	1	0	100%	1
9VPS_MLI_C_404	10%	39%	0.179	0.692	1.31	0.99	-	-	0	0	100%	1
9VPS_MLI_A_405	7%	38%	0.236	0.7	1.37	0.98	-	-	0	0	100%	1
9VPZ_MLI_A_402	100%	38%	0.032	0.991	1.36	0.98	-	-	0	0	100%	1
9VPY_MLI_B_403	88%	40%	0.071	0.953	1.26	1	-	-	0	0	100%	1
5XFW_MLI_D_403	85%	41%	0.074	0.945	1.15	1.04	-	-	0	0	100%	1
9VQ0_MLI_B_403	85%	36%	0.066	0.936	1.4	1.04	-	-	0	0	100%	1
9VPV_MLI_A_403	82%	38%	0.092	0.953	1.36	0.97	-	-	0	0	100%	1
6BUO_MLI_B_401	100%	33%	0.014	0.998	1.31	1.25	-	-	0	0	100%	1
6YMD_MLI_B_501	100%	38%	0.011	0.999	1.43	0.91	-	-	0	0	100%	1
9M9J_MLI_A_403	100%	37%	0.015	0.999	1.33	1.04	-	-	0	0	100%	1
4X1D_MLI_B_702	100%	9%	0.02	0.999	1.11	3.2	-	5	1	0	100%	1
5VIT_MLI_P_601	100%	32%	0.018	0.997	1.24	1.35	-	1	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.