Ligand validation:9PDA

BEN: BENZAMIDINE

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
9PDA_BEN_C_302	84%	31%	0.083	0.944	0.72	2	-	2	0	0	100%	1
9PDA_BEN_D_301	82%	27%	0.083	0.939	1.02	1.92	1	3	0	0	100%	1
9PDA_BEN_B_303	81%	43%	0.081	0.933	0.6	1.57	-	2	1	0	100%	1
9PDA_BEN_B_301	73%	35%	0.098	0.925	0.55	1.97	-	3	0	0	100%	1
9PDA_BEN_A_301	62%	79%	0.094	0.884	0.51	0.35	-	-	0	0	100%	1
9PDA_BEN_C_301	46%	48%	0.109	0.843	0.71	1.29	-	1	4	0	100%	1
9PDA_BEN_D_306	22%	62%	0.17	0.782	0.68	0.78	-	-	0	0	100%	0.5
9PDA_BEN_D_309	15%	45%	0.16	0.719	0.86	1.26	-	1	1	0	100%	1
9PDA_BEN_B_304	12%	53%	0.275	0.806	0.66	1.15	-	1	2	0	100%	0.7
9PDA_BEN_C_307	7%	57%	0.152	0.596	0.64	0.99	-	1	0	0	100%	1
9PCT_BEN_A_302	96%	66%	0.061	0.972	0.59	0.73	-	-	0	0	100%	1
4D96_BEN_A_502	100%	49%	0.023	0.994	0.98	1	1	1	0	0	100%	1
4I8K_BEN_A_252	100%	29%	0.033	0.993	0.81	1.99	-	4	1	0	100%	0.5
5MNH_BEN_A_304	100%	70%	0.042	0.993	0.61	0.56	-	-	0	0	100%	1
4I8G_BEN_A_302	100%	40%	0.039	0.989	0.83	1.48	-	2	1	0	100%	0.5
2BLW_BEN_A_1247	100%	23%	0.034	0.982	1.14	2.03	1	2	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.