UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 9KPW designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 9KPW_UDP_B_501 | 97% | 88% | 0.056 | 0.977 | 0.24 | 0.35 | - | - | 0 | 0 | 100% | 1 |
| 9KPW_UDP_C_501 | 93% | 89% | 0.065 | 0.966 | 0.23 | 0.35 | - | - | 0 | 0 | 100% | 1 |
| 9KPW_UDP_A_501 | 91% | 89% | 0.069 | 0.963 | 0.22 | 0.35 | - | - | 0 | 0 | 100% | 1 |
| 9KPW_UDP_D_501 | 91% | 88% | 0.067 | 0.96 | 0.23 | 0.36 | - | - | 0 | 0 | 100% | 1 |
| 9KPX_UDP_B_504 | 100% | 70% | 0.029 | 0.993 | 0.39 | 0.6 | - | 1 | 2 | 0 | 100% | 1 |
| 5F87_UDP_F_501 | 100% | 27% | 0.015 | 0.999 | 1.18 | 1.64 | 3 | 4 | 0 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |