Ligand validation:9GDJ

GOL: GLYCEROL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
9GDJ_GOL_A_309	87%	95%	0.073	0.949	0.08	0.28	-	-	0	0	100%	1
9GDJ_GOL_B_302	86%	93%	0.08	0.953	0.1	0.32	-	-	0	0	100%	1
9GDJ_GOL_B_303	84%	90%	0.084	0.952	0.11	0.42	-	-	0	0	100%	1
9GDJ_GOL_C_305	74%	92%	0.106	0.938	0.1	0.37	-	-	0	0	100%	1
9GDJ_GOL_B_305	73%	90%	0.099	0.929	0.11	0.41	-	-	0	0	100%	1
9GDJ_GOL_A_306	72%	93%	0.103	0.928	0.08	0.34	-	-	0	0	100%	1
9GDJ_GOL_C_311	61%	94%	0.126	0.917	0.1	0.31	-	-	0	0	100%	1
9GDJ_GOL_C_308	60%	94%	0.118	0.904	0.08	0.33	-	-	0	0	100%	1
9GDJ_GOL_C_306	59%	92%	0.127	0.909	0.09	0.38	-	-	1	0	100%	1
9GDJ_GOL_C_301	47%	94%	0.145	0.886	0.08	0.32	-	-	1	0	100%	1
9GDJ_GOL_B_304	44%	95%	0.132	0.858	0.08	0.3	-	-	0	0	100%	1
9GDJ_GOL_C_307	42%	95%	0.137	0.854	0.08	0.29	-	-	0	0	100%	1
9GDJ_GOL_A_311	40%	94%	0.185	0.899	0.08	0.31	-	-	0	0	100%	1
9GDJ_GOL_A_310	38%	93%	0.199	0.906	0.09	0.33	-	-	0	0	100%	1
9GDJ_GOL_B_307	38%	93%	0.161	0.863	0.09	0.35	-	-	1	0	100%	1
9GDJ_GOL_B_308	38%	95%	0.168	0.87	0.09	0.28	-	-	0	0	100%	1
9GDJ_GOL_A_305	36%	94%	0.177	0.872	0.09	0.31	-	-	2	0	100%	1
9GDJ_GOL_C_310	33%	94%	0.175	0.855	0.08	0.33	-	-	0	0	100%	1
9GDJ_GOL_C_314	29%	93%	0.175	0.834	0.09	0.33	-	-	1	0	100%	1
9GDJ_GOL_A_308	28%	95%	0.199	0.859	0.07	0.29	-	-	0	0	100%	0.67
9GDJ_GOL_C_312	27%	92%	0.172	0.822	0.09	0.36	-	-	0	0	100%	0.71
9GDJ_GOL_B_306	24%	94%	0.204	0.838	0.09	0.31	-	-	0	0	100%	0.69
9GDJ_GOL_A_312	23%	94%	0.173	0.799	0.1	0.31	-	-	0	0	100%	1
9GDJ_GOL_C_315	20%	95%	0.183	0.788	0.09	0.29	-	-	0	0	100%	1
9GDJ_GOL_A_307	17%	93%	0.19	0.775	0.09	0.34	-	-	0	0	100%	1
9GDJ_GOL_C_309	13%	94%	0.224	0.776	0.1	0.31	-	-	1	0	100%	0.63
9GDJ_GOL_C_313	11%	95%	0.252	0.788	0.08	0.3	-	-	2	0	100%	0.77
9GDJ_GOL_A_313	8%	94%	0.211	0.69	0.1	0.31	-	-	0	0	100%	1
5MR6_GOL_B_602	100%	63%	0.013	0.999	0.38	0.88	-	-	0	0	100%	1
2NT0_GOL_D_506	100%	69%	0.016	0.997	0.3	0.72	-	-	0	0	100%	1
9O0J_GOL_G_302	100%	75%	0.015	0.997	0.4	0.46	-	-	0	0	100%	1
23OM_GOL_A_303	100%	52%	0.017	0.997	0.7	1.01	-	-	0	0	100%	1
2YOQ_GOL_B_1196	100%	68%	0.019	0.996	0.68	0.42	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.