SPM: SPERMINE
SPM is a Ligand Of Interest in 7YWZ designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7YWZ_SPM_A_703 | 56% | 60% | 0.096 | 0.906 | 0.51 | 0.84 | - | - | 1 | 0 | 100% | 1 |
| 7YWZ_SPM_A_701 | 22% | 90% | 0.163 | 0.842 | 0.2 | 0.35 | - | - | 2 | 0 | 100% | 1 |
| 7YWZ_SPM_A_702 | 17% | 90% | 0.184 | 0.841 | 0.22 | 0.35 | - | - | 0 | 0 | 100% | 1 |
| 7YWZ_SPM_A_704 | 1% | 87% | 0.27 | 0.663 | 0.2 | 0.44 | - | - | 0 | 0 | 100% | 1 |
| 7NE7_SPM_A_902 | 44% | 70% | 0.111 | 0.873 | 0.38 | 0.61 | - | - | 0 | 0 | 100% | 1 |
| 7YX7_SPM_A_801 | 42% | 67% | 0.12 | 0.877 | 0.43 | 0.65 | - | - | 7 | 0 | 100% | 1 |
| 8ONO_SPM_A_703 | 39% | 74% | 0.125 | 0.868 | 0.17 | 0.71 | - | - | 3 | 0 | 100% | 1 |
| 7OB1_SPM_A_701 | 27% | 87% | 0.139 | 0.832 | 0.21 | 0.44 | - | - | 0 | 0 | 100% | 1 |
| 7ZJZ_SPM_A_802 | 27% | 92% | 0.141 | 0.833 | 0.15 | 0.35 | - | - | 3 | 0 | 100% | 1 |
| 3C6M_SPM_D_501 | 98% | 58% | 0.032 | 0.994 | 0.33 | 1.06 | - | - | 7 | 0 | 100% | 1 |
| 6E1X_SPM_C_201 | 98% | 53% | 0.032 | 0.993 | 0.56 | 1.06 | - | - | 2 | 0 | 100% | 1 |
| 8OEX_SPM_A_101 | 95% | 69% | 0.04 | 0.981 | 0.47 | 0.55 | - | - | 0 | 0 | 100% | 1 |
| 6AF2_SPM_D_201 | 91% | 64% | 0.055 | 0.991 | 0.33 | 0.85 | - | - | 0 | 0 | 100% | 1 |
| 1ICK_SPM_A_21 | 91% | 4% | 0.048 | 0.977 | 2.78 | 2.85 | 1 | 3 | 5 | 0 | 100% | 0.82 |














