SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 7CJJ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 7CJJ_SQD_A_409 | 52% | 25% | 0.174 | 0.931 | 0.96 | 2.05 | 3 | 11 | 0 | 0 | 100% | 1 |
| 7CJJ_SQD_a_409 | 49% | 32% | 0.198 | 0.944 | 1 | 1.68 | 3 | 11 | 0 | 0 | 100% | 1 |
| 7CJJ_SQD_a_411 | 42% | 41% | 0.164 | 0.882 | 1.04 | 1.25 | 3 | 7 | 0 | 0 | 100% | 1 |
| 7CJJ_SQD_A_411 | 39% | 40% | 0.167 | 0.872 | 1.05 | 1.28 | 3 | 8 | 0 | 0 | 100% | 1 |
| 7CJJ_SQD_B_620 | 37% | 36% | 0.173 | 0.868 | 1.01 | 1.51 | 3 | 9 | 0 | 0 | 100% | 1 |
| 7CJJ_SQD_D_413 | 28% | 25% | 0.224 | 0.913 | 1.15 | 1.87 | 3 | 11 | 0 | 0 | 80% | 0.7963 |
| 7CJJ_SQD_L_102 | 21% | 32% | 0.21 | 0.821 | 1.03 | 1.64 | 3 | 9 | 0 | 0 | 100% | 1 |
| 7CJJ_SQD_f_101 | 2% | 38% | 0.446 | 0.766 | 1.16 | 1.28 | 3 | 6 | 0 | 0 | 80% | 0.7963 |
| 5V2C_SQD_a_413 | 94% | 21% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_A_412 | 78% | 20% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
| 8IRC_SQD_a_411 | 77% | 29% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IR5_SQD_a_411 | 76% | 31% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IRF_SQD_a_410 | 76% | 29% | 0.125 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 0.49 |
| 8IR8_SQD_a_409 | 75% | 31% | 0.126 | 0.96 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 0.4 |
