PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
PGV is a Ligand Of Interest in 6J8M designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6J8M_PGV_N_609 | 56% | 43% | 0.192 | 0.965 | 0.93 | 1.26 | 2 | 5 | 2 | 0 | 100% | 1 |
| 6J8M_PGV_P_303 | 52% | 56% | 0.198 | 0.956 | 0.9 | 0.82 | 3 | 3 | 4 | 0 | 100% | 1 |
| 6J8M_PGV_A_608 | 51% | 44% | 0.214 | 0.97 | 0.93 | 1.22 | 2 | 4 | 5 | 0 | 100% | 1 |
| 6J8M_PGV_C_304 | 46% | 53% | 0.22 | 0.956 | 0.83 | 0.97 | 2 | 2 | 2 | 0 | 100% | 1 |
| 6J8M_PGV_C_305 | 9% | 48% | 0.232 | 0.725 | 1.08 | 0.95 | 2 | 3 | 1 | 0 | 100% | 1 |
| 6J8M_PGV_A_606 | 7% | 40% | 0.292 | 0.742 | 0.95 | 1.37 | 2 | 7 | 14 | 0 | 100% | 1 |
| 6J8M_PGV_P_304 | 6% | 44% | 0.243 | 0.684 | 1.15 | 1.03 | 2 | 3 | 4 | 0 | 100% | 1 |
| 6J8M_PGV_N_606 | 3% | 39% | 0.31 | 0.663 | 1 | 1.36 | 2 | 7 | 10 | 0 | 100% | 1 |
| 9IKG_PGV_A_614 | 96% | 53% | 0.073 | 0.982 | 0.74 | 1.06 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5B1B_PGV_C_302 | 94% | 56% | 0.078 | 0.979 | 0.81 | 0.87 | 1 | 1 | 3 | 0 | 100% | 1 |
| 7YPY_PGV_P_302 | 94% | 54% | 0.079 | 0.978 | 0.79 | 0.99 | 2 | 2 | 1 | 0 | 100% | 1 |
| 9IKH_PGV_C_303 | 94% | 53% | 0.08 | 0.979 | 0.77 | 1.06 | - | 3 | 1 | 0 | 100% | 1 |
| 9KUM_PGV_P_304 | 94% | 50% | 0.08 | 0.978 | 0.92 | 1.01 | 4 | 4 | 1 | 0 | 100% | 1 |
| 9IKF_PGV_P_304 | 93% | 54% | 0.084 | 0.979 | 0.87 | 0.92 | 2 | 3 | 0 | 0 | 100% | 1 |
