UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 6WMN designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 6WMN_UDP_D_402 | 90% | 35% | 0.069 | 0.956 | 0.92 | 1.54 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6WMN_UDP_C_402 | 89% | 35% | 0.071 | 0.957 | 0.88 | 1.55 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6WMN_UDP_B_402 | 86% | 34% | 0.074 | 0.946 | 0.93 | 1.54 | 1 | 5 | 1 | 0 | 100% | 1 |
| 6WMN_UDP_A_402 | 85% | 35% | 0.075 | 0.943 | 0.88 | 1.54 | 1 | 5 | 0 | 0 | 100% | 1 |
| 7JHO_UDP_A_401 | 97% | 25% | 0.054 | 0.98 | 1.07 | 1.86 | 2 | 6 | 1 | 0 | 100% | 1 |
| 7JHN_UDP_A_403 | 95% | 32% | 0.056 | 0.969 | 1 | 1.56 | - | 5 | 0 | 0 | 100% | 1 |
| 6WMO_UDP_A_402 | 95% | 32% | 0.055 | 0.966 | 0.99 | 1.6 | 2 | 5 | 1 | 0 | 100% | 1 |
| 6WMM_UDP_A_402 | 87% | 29% | 0.071 | 0.948 | 1.15 | 1.59 | 2 | 7 | 0 | 0 | 100% | 1 |
| 7JHI_UDP_C_403 | 76% | 32% | 0.072 | 0.91 | 1.04 | 1.56 | 2 | 5 | 2 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |