GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6MZF designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6MZF_GDP_P_600 | 83% | 26% | 0.087 | 0.95 | 1.16 | 1.71 | 3 | 6 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_B_600 | 66% | 26% | 0.129 | 0.937 | 1.18 | 1.69 | 4 | 6 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_I_600 | 62% | 26% | 0.117 | 0.91 | 1.18 | 1.7 | 3 | 6 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_W_600 | 59% | 27% | 0.115 | 0.897 | 1.17 | 1.67 | 3 | 6 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_R_600 | 59% | 26% | 0.13 | 0.913 | 1.18 | 1.69 | 3 | 6 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_D_600 | 55% | 26% | 0.123 | 0.89 | 1.19 | 1.69 | 4 | 6 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_K_600 | 50% | 26% | 0.127 | 0.878 | 1.19 | 1.7 | 4 | 6 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_Y_600 | 43% | 26% | 0.156 | 0.881 | 1.19 | 1.7 | 4 | 6 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 5JCB_GDP_B_501 | 100% | 20% | 0.022 | 0.997 | 1.38 | 1.89 | 5 | 8 | 0 | 0 | 100% | 1 |
| 7VMK_GDP_B_501 | 100% | 24% | 0.025 | 0.997 | 1.28 | 1.73 | 4 | 6 | 0 | 0 | 100% | 1 |
| 6MZG_GDP_D_600 | 100% | 26% | 0.026 | 0.997 | 1.14 | 1.75 | 2 | 6 | 2 | 0 | 100% | 1 |
| 6PC4_GDP_B_501 | 100% | 27% | 0.025 | 0.996 | 1.16 | 1.69 | 2 | 6 | 1 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
| 4EKC_GDP_A_400 | 100% | 24% | 0.016 | 0.999 | 1.2 | 1.82 | 4 | 6 | 3 | 0 | 100% | 1 |














