SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 6DHG designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6DHG_SQD_A_410 | 61% | 22% | 0.151 | 0.948 | 1.1 | 2.1 | 6 | 12 | 0 | 0 | 96% | 0.963 |
| 6DHG_SQD_a_411 | 54% | 27% | 0.161 | 0.927 | 0.99 | 1.9 | 5 | 9 | 0 | 0 | 100% | 1 |
| 6DHG_SQD_B_621 | 50% | 29% | 0.16 | 0.912 | 0.96 | 1.83 | 3 | 15 | 0 | 0 | 100% | 1 |
| 6DHG_SQD_F_101 | 36% | 28% | 0.161 | 0.913 | 0.93 | 1.95 | 1 | 10 | 0 | 0 | 67% | 0.6667 |
| 6DHG_SQD_b_601 | 35% | 22% | 0.17 | 0.876 | 1.01 | 2.23 | 2 | 17 | 0 | 0 | 91% | 0.9074 |
| 6DHG_SQD_f_101 | 23% | 27% | 0.217 | 0.885 | 1.12 | 1.8 | 5 | 13 | 0 | 0 | 76% | 0.7593 |
| 6DHG_SQD_A_411 | 23% | 35% | 0.233 | 0.906 | 1.09 | 1.47 | 4 | 4 | 0 | 0 | 72% | 0.7222 |
| 6DHG_SQD_a_412 | 20% | 36% | 0.194 | 0.853 | 1.06 | 1.44 | 2 | 5 | 0 | 0 | 67% | 0.6667 |
| 5V2C_SQD_a_413 | 94% | 21% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_A_412 | 78% | 20% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
| 8IRC_SQD_a_411 | 77% | 29% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IR5_SQD_a_411 | 76% | 31% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IRF_SQD_a_410 | 76% | 29% | 0.125 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 0.49 |
| 8IR8_SQD_a_409 | 75% | 31% | 0.126 | 0.96 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 0.4 |
