SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 6DHF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6DHF_SQD_A_411 | 66% | 21% | 0.131 | 0.943 | 1.02 | 2.41 | 4 | 14 | 0 | 0 | 96% | 0.963 |
| 6DHF_SQD_a_410 | 63% | 28% | 0.13 | 0.926 | 1.02 | 2.02 | 5 | 13 | 0 | 0 | 100% | 1 |
| 6DHF_SQD_B_622 | 52% | 32% | 0.129 | 0.887 | 0.94 | 1.85 | 2 | 13 | 0 | 0 | 100% | 1 |
| 6DHF_SQD_F_101 | 38% | 31% | 0.152 | 0.914 | 1.01 | 1.85 | 3 | 12 | 0 | 0 | 67% | 0.6667 |
| 6DHF_SQD_b_601 | 37% | 29% | 0.138 | 0.853 | 0.96 | 2 | 2 | 13 | 0 | 0 | 91% | 0.9074 |
| 6DHF_SQD_A_412 | 27% | 40% | 0.189 | 0.886 | 1.08 | 1.32 | 3 | 3 | 0 | 0 | 72% | 0.7222 |
| 6DHF_SQD_f_101 | 22% | 32% | 0.221 | 0.881 | 1.14 | 1.67 | 5 | 8 | 0 | 0 | 76% | 0.7593 |
| 6DHF_SQD_a_411 | 16% | 39% | 0.172 | 0.804 | 1.1 | 1.35 | 2 | 4 | 0 | 0 | 67% | 0.6667 |
| 5V2C_SQD_a_413 | 94% | 24% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_A_412 | 77% | 23% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
| 8IRC_SQD_a_411 | 77% | 32% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IR5_SQD_a_411 | 75% | 33% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IRF_SQD_a_410 | 75% | 32% | 0.125 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 0.49 |
| 8IR8_SQD_a_409 | 75% | 33% | 0.126 | 0.96 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 0.4 |
