Ligand validation:5YQS

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5YQS designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5YQS_NAG_B_804	58%	40%	0.155	0.934	0.5	1.85	-	4	0	0	100%	0.9333
5YQS_NAG_A_804	58%	49%	0.156	0.934	0.49	1.49	-	3	0	0	100%	0.9333
5YQS_NAG_B_801	22%	50%	0.295	0.915	0.57	1.35	-	2	0	0	100%	0.9333
5YQS_NAG_A_801	21%	34%	0.273	0.882	0.67	2.03	-	7	0	0	100%	0.9333
5YQS_NAG_A_810	20%	33%	0.271	0.877	0.99	1.77	-	5	0	0	100%	0.9333
5YQS_NAG_A_809	16%	47%	0.323	0.893	0.64	1.39	-	2	0	0	100%	0.9333
5YQS_NAG_B_809	15%	44%	0.313	0.875	0.68	1.49	-	2	0	0	100%	0.9333
5YQS_NAG_B_810	11%	47%	0.332	0.854	0.64	1.39	-	4	0	0	100%	0.9333
5YQS_NAG_A_811	7%	48%	0.371	0.834	0.63	1.37	-	3	0	0	100%	0.9333
7EAP_NAG_A_805	86%	44%	0.086	0.956	0.86	1.35	-	3	0	0	100%	0.9333
5YOT_NAG_B_811	77%	49%	0.102	0.94	0.61	1.37	-	3	0	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.