5Y3K
NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5Y3K designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
5Y3K_NAG_B_1008 | 72% | 63% | 0.127 | 0.951 | 0.32 | 1.06 | - | 2 | 0 | 0 | 100% | 0.9333 |
5Y3K_NAG_A_1008 | 72% | 57% | 0.132 | 0.956 | 0.43 | 1.18 | - | 1 | 0 | 0 | 100% | 0.9333 |
5Y3K_NAG_B_1009 | 71% | 54% | 0.137 | 0.959 | 0.49 | 1.26 | - | 2 | 0 | 0 | 100% | 0.9333 |
5Y3K_NAG_A_1009 | 71% | 60% | 0.141 | 0.962 | 0.31 | 1.17 | - | 1 | 1 | 0 | 100% | 0.9333 |
5Y3K_NAG_B_1003 | 57% | 50% | 0.14 | 0.914 | 0.48 | 1.44 | - | 1 | 0 | 0 | 100% | 0.9333 |
5Y3K_NAG_A_1003 | 56% | 43% | 0.132 | 0.905 | 0.51 | 1.73 | - | 5 | 0 | 0 | 100% | 0.9333 |
5Y3K_NAG_A_1007 | 50% | 49% | 0.168 | 0.92 | 0.53 | 1.44 | - | 3 | 0 | 0 | 100% | 0.9333 |
5Y3K_NAG_A_1006 | 47% | 56% | 0.166 | 0.906 | 0.48 | 1.21 | - | 2 | 0 | 0 | 100% | 0.9333 |
5Y3K_NAG_B_1007 | 34% | 48% | 0.169 | 0.85 | 0.54 | 1.45 | - | 3 | 0 | 0 | 100% | 0.9333 |
5Y3K_NAG_A_1004 | 33% | 36% | 0.257 | 0.94 | 0.53 | 2.07 | - | 3 | 0 | 0 | 100% | 0.9333 |
5Y3K_NAG_B_1004 | 29% | 45% | 0.271 | 0.929 | 0.42 | 1.7 | - | 3 | 0 | 0 | 100% | 0.9333 |
5Y3K_NAG_A_1005 | 25% | 67% | 0.254 | 0.889 | 0.36 | 0.89 | - | - | 0 | 0 | 100% | 0.9333 |
5Y3K_NAG_B_1005 | 15% | 44% | 0.308 | 0.868 | 0.66 | 1.53 | - | 2 | 0 | 0 | 100% | 0.9333 |
5Y3K_NAG_B_1006 | 14% | 53% | 0.32 | 0.873 | 0.73 | 1.08 | - | - | 0 | 0 | 100% | 0.9333 |
5Y3K_NAG_B_1010 | 9% | 39% | 0.316 | 0.812 | 0.76 | 1.69 | - | 2 | 0 | 0 | 100% | 0.9333 |
5Y3J_NAG_B_1009 | 91% | 44% | 0.08 | 0.966 | 0.57 | 1.61 | - | 4 | 0 | 0 | 100% | 0.9333 |
5Y3L_NAG_A_1008 | 88% | 50% | 0.092 | 0.968 | 0.43 | 1.47 | - | 3 | 0 | 0 | 100% | 0.9333 |
3WPC_NAG_A_902 | 73% | 49% | 0.1 | 0.928 | 0.8 | 1.16 | 1 | 2 | 0 | 0 | 100% | 0.9333 |
3WPD_NAG_A_907 | 64% | 54% | 0.148 | 0.949 | 0.55 | 1.22 | - | 1 | 0 | 0 | 100% | 0.9333 |
3WPB_NAG_A_902 | 63% | 30% | 0.152 | 0.95 | 0.44 | 2.43 | - | 3 | 1 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.81 | 0.95 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 99% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |