UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 5U6M designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5U6M_UDP_A_502 | 71% | 8% | 0.15 | 0.971 | 3.74 | 1.2 | 10 | 3 | 0 | 0 | 100% | 1 |
| 5U6M_UDP_B_502 | 60% | 7% | 0.185 | 0.971 | 3.8 | 1.28 | 9 | 2 | 1 | 0 | 100% | 1 |
| 5V2J_UDP_B_503 | 86% | 11% | 0.112 | 0.981 | 3.03 | 1.36 | 12 | 6 | 0 | 0 | 100% | 1 |
| 5V2K_UDP_A_503 | 84% | 13% | 0.117 | 0.981 | 2.98 | 1.24 | 12 | 5 | 0 | 0 | 100% | 1 |
| 5U6N_UDP_A_504 | 82% | 8% | 0.128 | 0.984 | 3.61 | 1.27 | 8 | 1 | 0 | 0 | 100% | 1 |
| 5U6S_UDP_B_503 | 58% | 9% | 0.197 | 0.978 | 3.56 | 1.13 | 9 | 2 | 0 | 0 | 100% | 1 |
| 4PHR_UDP_A_301 | 100% | 43% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 47% | 0.046 | 0.992 | 1.19 | 0.9 | 2 | 1 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_A_401 | 100% | 20% | 0.046 | 0.991 | 2.39 | 1.19 | 4 | 3 | 0 | 0 | 100% | 1 |
| 5GY7_UDP_B_401 | 99% | 45% | 0.047 | 0.987 | 0.98 | 1.18 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 35% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
