Ligand validation:5JMY

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5JMY designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5JMY_NAG_A_802	61%	72%	0.153	0.944	0.29	0.77	-	1	0	0	100%	0.9333
5JMY_NAG_A_801	48%	76%	0.173	0.916	0.31	0.63	-	-	0	0	100%	0.9333
5JMY_NAG_A_805	22%	77%	0.242	0.86	0.31	0.6	-	-	0	0	100%	0.9333
5JMY_NAG_B_805	17%	80%	0.241	0.823	0.34	0.5	-	-	0	0	100%	0.9333
5JMY_NAG_B_802	17%	73%	0.278	0.858	0.3	0.73	-	1	0	0	100%	0.9333
5JMY_NAG_B_801	10%	71%	0.291	0.8	0.32	0.78	-	1	0	0	100%	0.9333
6GID_NAG_A_801	75%	84%	0.095	0.929	0.3	0.45	-	-	0	0	100%	0.9333
6SUK_NAG_A_802	67%	87%	0.119	0.927	0.29	0.39	-	-	0	0	100%	0.9333
6XVP_NAG_A_806	63%	86%	0.127	0.923	0.24	0.47	-	-	0	0	100%	0.9333
6SH1_NAG_CCC_804	62%	59%	0.103	0.895	0.34	1.21	-	2	0	0	100%	0.9333
6THP_NAG_A_803	62%	53%	0.161	0.954	0.49	1.32	-	3	0	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.