5YKC | pdb_00005ykc


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5YKC designated by the Author
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5YKC_NAG_A_602 36% 52% 0.121 0.8120.6 1.13 - 100100%1
5YKC_NAG_B_605 33% 71% 0.124 0.8010.51 0.47 - -00100%1
5YKC_NAG_A_605 23% 17% 0.106 0.7241.54 1.99 3 300100%1
5YKC_NAG_B_602 18% 61% 0.145 0.7330.68 0.65 - -00100%1
5YKC_NAG_B_601 16% 67% 0.118 0.690.6 0.52 - -00100%1
5YKC_NAG_C_604 14% 67% 0.181 0.7380.5 0.6 - -00100%1
5YKC_NAG_C_602 11% 49% 0.141 0.6630.3 1.53 - 200100%1
5YKC_NAG_A_601 7% 28% 0.172 0.6441.51 1.28 3 300100%1
5YKC_NAG_B_604 5% 11% 0.147 0.569 2.43 1.67 2 300100%1
5YKC_NAG_B_603 5% 68% 0.167 0.5820.54 0.55 - -10100%1
5YKC_NAG_C_601 3% 16% 0.183 0.525 1.93 1.69 3 260100%1
5YKC_NAG_C_603 1% 31% 0.155 0.364 1.2 1.44 1 220100%1
5YT9_NAG_A_1001 82% 53% 0.064 0.9230.83 0.84 1 100100%1
5YT8_NAG_A_601 34% 64% 0.108 0.790.56 0.67 - 100100%1
6KCJ_NAG_A_601 19% 41% 0.149 0.7421.27 0.94 2 100100%1
2QFR_NAG_B_451 100% 64% 0.013 0.9980.49 0.72 - 100100%1
5LDS_NAG_C_1003 100% 66% 0.016 0.9970.54 0.62 - -30100%1
7DDF_NAG_B_401 100% 84% 0.016 0.9960.21 0.49 - -00100%1
2HQM_NAG_A_1301 100% 62% 0.018 0.9960.59 0.7 - -00100%1
3H0C_NAG_A_796 100% 54% 0.02 0.9950.47 1.12 - 100100%1