5XDX | pdb_00005xdx


PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE

PGV is a Ligand Of Interest in 5XDX designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5XDX_PGV_N_607 70% 52% 0.15 0.9730.89 0.86 2 220100%1
5XDX_PGV_A_607 63% 51% 0.17 0.970.88 0.91 2 320100%1
5XDX_PGV_C_305 58% 54% 0.185 0.9690.85 0.81 2 130100%1
5XDX_PGV_P_303 54% 52% 0.194 0.9630.9 0.83 2 230100%1
5XDX_PGV_C_306 5% 48% 0.299 0.7230.96 0.96 2 210100%1
5XDX_PGV_M_101 4% 46% 0.312 0.7020.98 1 2 230100%1
5XDX_PGV_P_304 3% 48% 0.332 0.6770.97 0.93 2 210100%1
5XDX_PGV_N_606 1% 47% 0.401 0.6450.97 0.97 2 230100%1
9IKG_PGV_A_614 94% 50% 0.073 0.9820.74 1.06 2 200100%1
5B1B_PGV_C_302 93% 53% 0.078 0.9790.81 0.87 1 130100%1
7YPY_PGV_P_302 92% 51% 0.079 0.9780.79 0.99 2 210100%1
9IKH_PGV_C_303 92% 50% 0.08 0.9790.77 1.06 - 310100%1
9KUM_PGV_P_304 92% 47% 0.08 0.9780.92 1.01 4 410100%1
9IKF_PGV_P_304 91% 51% 0.084 0.9790.87 0.92 2 300100%1