PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 5WMH designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5WMH_PLP_A_701 | 46% | 22% | 0.207 | 0.955 | 1.48 | 1.74 | 2 | 8 | 1 | 0 | 94% | 0.9375 |
5WMH_PLP_D_701 | 40% | 24% | 0.229 | 0.953 | 1.72 | 1.42 | 1 | 4 | 3 | 0 | 94% | 0.9375 |
5WMH_PLP_B_701 | 38% | 31% | 0.254 | 0.97 | 1.27 | 1.48 | 1 | 2 | 1 | 0 | 94% | 0.9375 |
5WMH_PLP_C_701 | 32% | 28% | 0.26 | 0.946 | 1.59 | 1.29 | 2 | 3 | 2 | 0 | 94% | 0.9375 |
5WMH_PLP_E_701 | 28% | 50% | 0.269 | 0.935 | 0.99 | 0.94 | - | - | 1 | 0 | 94% | 0.9375 |
5WMH_PLP_F_701 | 16% | 40% | 0.324 | 0.906 | 1.2 | 1.16 | 1 | 2 | 4 | 0 | 94% | 0.9375 |
6F5V_PLP_B_501 | 92% | 18% | 0.085 | 0.977 | 1.84 | 1.72 | 2 | 4 | 2 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |