NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE
NAD is a Ligand Of Interest in 5VMT designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5VMT_NAD_B_401 | 99% | 71% | 0.04 | 0.986 | 0.46 | 0.53 | - | 1 | 0 | 0 | 100% | 1 |
| 5VMT_NAD_F_401 | 98% | 72% | 0.05 | 0.978 | 0.34 | 0.59 | - | - | 0 | 0 | 100% | 1 |
| 5VMT_NAD_D_401 | 97% | 74% | 0.055 | 0.977 | 0.34 | 0.54 | - | 1 | 0 | 0 | 100% | 1 |
| 5VMT_NAD_H_401 | 95% | 76% | 0.06 | 0.973 | 0.34 | 0.5 | - | - | 1 | 0 | 100% | 1 |
| 5VMT_NAD_A_401 | 95% | 76% | 0.061 | 0.97 | 0.38 | 0.47 | - | - | 2 | 0 | 100% | 1 |
| 5VMT_NAD_G_401 | 70% | 75% | 0.106 | 0.926 | 0.43 | 0.44 | - | - | 3 | 0 | 100% | 1 |
| 5VMT_NAD_C_401 | 60% | 75% | 0.116 | 0.903 | 0.39 | 0.49 | - | 1 | 3 | 0 | 100% | 0.92 |
| 5VMT_NAD_E_401 | 42% | 72% | 0.131 | 0.847 | 0.42 | 0.52 | - | 1 | 3 | 0 | 100% | 0.89 |
| 9ZAG_NAD_E_403 | 99% | 44% | 0.041 | 0.984 | 0.98 | 1.07 | 3 | 5 | 0 | 0 | 100% | 1 |
| 9Z9C_NAD_N_401 | 97% | 43% | 0.054 | 0.976 | 1.21 | 0.9 | 2 | 3 | 0 | 0 | 100% | 1 |
| 9Y4U_NAD_B_401 | 94% | 39% | 0.063 | 0.969 | 1.08 | 1.2 | 2 | 6 | 2 | 0 | 100% | 1 |
| 9ZAO_NAD_A_401 | 93% | 45% | 0.062 | 0.964 | 1.14 | 0.9 | 3 | 2 | 0 | 0 | 100% | 1 |
| 1DBV_NAD_O_336 | 100% | 18% | 0.012 | 0.999 | 1.39 | 1.98 | 5 | 12 | 0 | 0 | 100% | 1 |
| 1HZJ_NAD_A_400 | 100% | 22% | 0.009 | 0.999 | 1.43 | 1.7 | 8 | 8 | 1 | 0 | 100% | 1 |
| 1OWB_NAD_A_3000 | 100% | 7% | 0.015 | 0.998 | 2.36 | 2.37 | 10 | 13 | 1 | 0 | 100% | 1 |
| 2NAD_NAD_B_394 | 100% | 7% | 0.016 | 0.997 | 2.25 | 2.54 | 14 | 23 | 3 | 0 | 100% | 1 |
| 2QG4_NAD_F_500 | 100% | 19% | 0.017 | 0.998 | 1.81 | 1.58 | 4 | 9 | 0 | 0 | 100% | 1 |














