NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE
NAD is a Ligand Of Interest in 5VMT designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5VMT_NAD_F_401 | 87% | 65% | 0.107 | 0.978 | 0.53 | 0.78 | - | 1 | 0 | 0 | 100% | 1 |
5VMT_NAD_B_401 | 83% | 65% | 0.119 | 0.979 | 0.62 | 0.71 | - | 2 | 0 | 0 | 100% | 1 |
5VMT_NAD_D_401 | 79% | 65% | 0.123 | 0.97 | 0.57 | 0.74 | - | 2 | 0 | 0 | 100% | 1 |
5VMT_NAD_A_401 | 79% | 69% | 0.126 | 0.972 | 0.54 | 0.65 | - | 1 | 2 | 0 | 100% | 1 |
5VMT_NAD_H_401 | 78% | 68% | 0.12 | 0.963 | 0.52 | 0.69 | - | 1 | 1 | 0 | 100% | 1 |
5VMT_NAD_G_401 | 60% | 69% | 0.148 | 0.933 | 0.58 | 0.6 | - | 1 | 1 | 0 | 100% | 1 |
5VMT_NAD_C_401 | 48% | 66% | 0.17 | 0.912 | 0.58 | 0.69 | - | 2 | 1 | 0 | 100% | 0.92 |
5VMT_NAD_E_401 | 35% | 68% | 0.192 | 0.878 | 0.59 | 0.62 | - | 1 | 3 | 0 | 100% | 0.89 |
4URF_NAD_A_1249 | 100% | 45% | 0.034 | 0.995 | 0.96 | 1.2 | 2 | 4 | 0 | 0 | 100% | 1 |
2C5A_NAD_B_1374 | 100% | 25% | 0.039 | 0.992 | 1.34 | 1.84 | 6 | 7 | 1 | 0 | 100% | 1 |
1HET_NAD_A_402 | 100% | 11% | 0.043 | 0.994 | 2.25 | 2.1 | 9 | 8 | 0 | 0 | 100% | 0.9068 |
2JHF_NAD_B_403 | 100% | 18% | 0.04 | 0.99 | 2.08 | 1.62 | 11 | 5 | 2 | 0 | 100% | 1 |
1HEU_NAD_B_402 | 100% | 8% | 0.043 | 0.993 | 2.5 | 2.41 | 13 | 11 | 0 | 0 | 100% | 0.8886 |