NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NDP is a Ligand Of Interest in 5VG6 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 5VG6_NDP_C_401 | 97% | 69% | 0.054 | 0.975 | 0.44 | 0.61 | - | - | 0 | 0 | 100% | 1 |
| 5VG6_NDP_I_401 | 96% | 70% | 0.054 | 0.973 | 0.46 | 0.56 | - | - | 0 | 0 | 100% | 1 |
| 5VG6_NDP_J_401 | 95% | 66% | 0.058 | 0.969 | 0.54 | 0.62 | - | 1 | 0 | 0 | 100% | 1 |
| 5VG6_NDP_A_401 | 95% | 68% | 0.059 | 0.968 | 0.51 | 0.56 | - | - | 0 | 0 | 100% | 1 |
| 5VG6_NDP_E_401 | 88% | 75% | 0.075 | 0.955 | 0.28 | 0.59 | - | 1 | 0 | 0 | 100% | 1 |
| 5VG6_NDP_B_401 | 87% | 77% | 0.072 | 0.949 | 0.33 | 0.49 | - | - | 0 | 0 | 100% | 1 |
| 5VG6_NDP_G_401 | 70% | 75% | 0.104 | 0.925 | 0.36 | 0.51 | - | 1 | 0 | 0 | 100% | 1 |
| 5VG6_NDP_H_401 | 54% | 74% | 0.131 | 0.894 | 0.3 | 0.59 | - | 1 | 0 | 0 | 100% | 1 |
| 5VG6_NDP_F_401 | 45% | 78% | 0.127 | 0.855 | 0.31 | 0.49 | - | - | 1 | 0 | 100% | 1 |
| 5VG6_NDP_D_401 | 41% | 77% | 0.13 | 0.845 | 0.33 | 0.5 | - | - | 1 | 0 | 100% | 1 |
| 1A80_NDP_A_300 | 100% | 15% | 0.01 | 0.999 | 1.91 | 1.79 | 8 | 8 | 10 | 0 | 100% | 1 |
| 2PF8_NDP_A_318 | 100% | 49% | 0.011 | 0.999 | 1.13 | 0.77 | 3 | - | 4 | 0 | 100% | 1 |
| 1H6D_NDP_L_500 | 100% | 18% | 0.016 | 0.998 | 1.69 | 1.72 | 12 | 13 | 10 | 0 | 100% | 1 |
| 2DBV_NDP_O_336 | 100% | 14% | 0.015 | 0.997 | 1.56 | 2.18 | 8 | 21 | 2 | 0 | 100% | 1 |
| 2I16_NDP_A_319 | 100% | 47% | 0.018 | 0.999 | 1.21 | 0.74 | 3 | - | 0 | 0 | 100% | 1 |