XYS: alpha-D-xylopyranose
XYS is a Ligand Of Interest in 5UNC designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5UNC_XYS_C_404 | 71% | 29% | 0.126 | 0.947 | 1.47 | 1.53 | 1 | 3 | 2 | 0 | 100% | 0.42 |
5UNC_XYS_D_402 | 58% | 33% | 0.145 | 0.926 | 1.49 | 1.25 | 1 | 2 | 0 | 0 | 100% | 0.37 |
5UNC_XYS_A_403 | 49% | 28% | 0.171 | 0.919 | 1.65 | 1.36 | 1 | 3 | 1 | 0 | 100% | 0.31 |
5UNC_XYS_A_402 | 35% | 30% | 0.186 | 0.876 | 1.67 | 1.24 | 1 | 2 | 1 | 0 | 100% | 0.32 |
5A03_XYS_B_1342 | 92% | 35% | 0.063 | 0.953 | 1.68 | 1.01 | 1 | 1 | 0 | 0 | 100% | 1 |
8OZ1_XYS_A_804 | 91% | 61% | 0.064 | 0.967 | 0.83 | 0.66 | - | - | 0 | 0 | 90% | 0.9 |
8BQA_XYS_AAA_402 | 88% | 36% | 0.058 | 0.951 | 0.83 | 1.77 | - | 3 | 0 | 0 | 90% | 0.9 |
7PLC_XYS_C_302 | 85% | 62% | 0.096 | 0.961 | 0.55 | 0.87 | - | 1 | 1 | 0 | 100% | 1 |
2CDC_XYS_D_1371 | 82% | 48% | 0.1 | 0.954 | 1.01 | 0.99 | 1 | 1 | 0 | 0 | 100% | 1 |