UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 5U6S designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5U6S_UDP_B_503 | 98% | 9% | 0.05 | 0.978 | 3 | 1.46 | 13 | 7 | 0 | 0 | 100% | 1 |
| 5U6S_UDP_A_503 | 95% | 8% | 0.062 | 0.973 | 3.03 | 1.54 | 13 | 9 | 0 | 0 | 100% | 1 |
| 5U6N_UDP_A_504 | 98% | 7% | 0.048 | 0.981 | 3.09 | 1.62 | 13 | 7 | 0 | 0 | 100% | 1 |
| 5V2K_UDP_B_503 | 98% | 8% | 0.05 | 0.979 | 3.16 | 1.49 | 13 | 7 | 0 | 0 | 100% | 1 |
| 5V2J_UDP_B_503 | 96% | 8% | 0.059 | 0.975 | 3.13 | 1.55 | 13 | 8 | 0 | 0 | 100% | 1 |
| 5U6M_UDP_A_502 | 95% | 7% | 0.057 | 0.968 | 3.22 | 1.6 | 14 | 10 | 0 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |
