GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 5O74 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5O74_GDP_B_500 | 50% | 38% | 0.186 | 0.939 | 0.93 | 1.36 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5O74_GDP_H_500 | 46% | 39% | 0.191 | 0.93 | 0.98 | 1.28 | 1 | 3 | 1 | 0 | 100% | 1 |
| 5O74_GDP_L_500 | 38% | 39% | 0.18 | 0.886 | 0.96 | 1.29 | 1 | 3 | 0 | 0 | 100% | 1 |
| 5O74_GDP_D_500 | 20% | 42% | 0.182 | 0.786 | 0.94 | 1.21 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5O74_GDP_F_500 | 16% | 36% | 0.23 | 0.811 | 1.02 | 1.37 | 2 | 4 | 0 | 0 | 100% | 1 |
| 5O74_GDP_J_500 | 14% | 37% | 0.227 | 0.79 | 0.98 | 1.37 | 1 | 4 | 1 | 0 | 100% | 1 |
| 8ALK_GDP_B_201 | 78% | 40% | 0.118 | 0.965 | 0.93 | 1.28 | 1 | 4 | 0 | 0 | 100% | 1 |
| 4I1O_GDP_G_202 | 77% | 37% | 0.129 | 0.976 | 1.22 | 1.18 | 1 | 4 | 12 | 0 | 100% | 1 |
| 4HLQ_GDP_H_202 | 63% | 15% | 0.152 | 0.952 | 1.98 | 1.71 | 4 | 5 | 11 | 0 | 100% | 1 |
| 6SKU_GDP_B_201 | 61% | 43% | 0.165 | 0.959 | 0.97 | 1.15 | 1 | 2 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 22% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9C3K_GDP_B_201 | 100% | 38% | 0.014 | 0.998 | 1.15 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8ECR_GDP_A_302 | 100% | 28% | 0.017 | 0.998 | 1.48 | 1.32 | 2 | 4 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 44% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 36% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
