5NHD | pdb_00005nhd


XYP: beta-D-xylopyranose

XYP is a Ligand Of Interest in 5NHD designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5NHD_XYP_A_504 25% 51% 0.216 0.8610.58 1.18 - 100100%1
5NHD_XYP_B_508 19% 57% 0.253 0.8580.52 0.96 - 100100%1
5NHD_XYP_B_504 12% 53% 0.271 0.8120.49 1.18 - 200100%1
5NHD_XYP_C_506 11% 57% 0.222 0.7510.52 0.99 - 100100%1
5NHD_XYP_B_506 11% 37% 0.262 0.7880.47 1.86 - 400100%1
5NHD_XYP_B_505 9% 21% 0.302 0.810.9 2.26 - 500100%1
5NHD_XYP_A_507 8% 27% 0.26 0.7561.19 1.63 1 200100%1
5NHD_XYP_A_506 7% 64% 0.255 0.7320.43 0.78 - -00100%1
5NHD_XYP_C_505 6% 20% 0.296 0.7411.11 2.13 1 410100%1
5NHD_XYP_D_506 6% 47% 0.324 0.7670.51 1.38 - 310100%1
6T8E_XYP_D_504 52% 52% 0.106 0.8610.55 1.17 - 200100%1
5NH7_XYP_A_504 44% 50% 0.174 0.9050.68 1.14 - 100100%1
5NH9_XYP_A_504 41% 51% 0.161 0.8770.68 1.07 - -00100%1
5NH8_XYP_A_504 36% 57% 0.19 0.8870.56 0.93 - -00100%1
5NHE_XYP_A_504 33% 52% 0.196 0.880.42 1.3 - 200100%1
1OD8_XYP_A_1311 99% 60% 0.047 0.9920.75 0.64 - -00100%1
1V0M_XYP_A_1304 99% 67% 0.035 0.9930.82 0.33 - -0090%1
8Y00_XYP_D_201 98% 26% 0.032 0.9860.63 2.19 - 71090%1
2WYS_XYP_A_1001 98% 36% 0.052 0.9830.69 1.7 - 430100%1
4PMY_XYP_A_401 98% 69% 0.051 0.9790.49 0.57 - -00100%1