5NH8 | pdb_00005nh8


XYP: beta-D-xylopyranose

XYP is a Ligand Of Interest in 5NH8 designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5NH8_XYP_D_504 50% 57% 0.111 0.8590.51 0.96 - -00100%1
5NH8_XYP_A_504 44% 60% 0.11 0.8360.53 0.85 - -00100%1
5NH8_XYP_B_505 39% 55% 0.12 0.8230.48 1.09 - 100100%1
5NH8_XYP_B_501 28% 58% 0.151 0.8020.66 0.8 - 100100%1
5NH8_XYP_C_504 24% 43% 0.128 0.7560.66 1.4 - 100100%1
5NH8_XYP_A_505 14% 62% 0.158 0.7140.5 0.79 - -00100%1
5NH8_XYP_A_506 12% 68% 0.154 0.6890.51 0.56 - -10100%1
5NH8_XYP_D_505 10% 56% 0.184 0.7010.61 0.92 - -00100%1
6T8E_XYP_D_504 97% 56% 0.048 0.9740.53 1 - 100100%1
5NHE_XYP_A_507 62% 54% 0.1 0.8910.57 1.03 - 110100%1
6T8F_XYP_A_504 58% 39% 0.105 0.8810.8 1.44 - 300100%1
5NH9_XYP_C_501 53% 34% 0.106 0.8641.02 1.48 - 310100%1
5NHD_XYP_A_504 49% 53% 0.107 0.8520.55 1.13 - 100100%1
4PMY_XYP_A_401 100% 73% 0.017 0.9960.47 0.45 - -00100%1
1OD8_XYP_A_1311 100% 64% 0.027 0.9920.69 0.55 - -00100%1
3FYU_XYP_C_1001 100% 48% 0.033 0.9931.11 0.8 - -00100%1
5L6G_XYP_A_510 100% 65% 0.033 0.9880.42 0.77 - -00100%1
1W9T_XYP_B_1148 100% 20% 0.022 0.9941.19 2.06 1 56090%1