5NDV | pdb_00005ndv


PAR: PAROMOMYCIN

PAR is a Ligand Of Interest in 5NDV designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5NDV_PAR_2_1903 75% 68% 0.097 0.9340.21 0.86 - 310100%0.98
5NDV_PAR_1_3424 74% 73% 0.092 0.9230.15 0.75 - 220100%0.94
5NDV_PAR_1_3423 73% 71% 0.101 0.930.19 0.77 - 110100%0.92
5NDV_PAR_1_3416 73% 59% 0.095 0.9230.25 1.15 - 570100%0.94
5NDV_PAR_1_3420 72% 64% 0.093 0.9180.19 1.02 - 320100%0.86
5NDV_PAR_1_3408 71% 60% 0.11 0.9340.22 1.11 - 500100%0.81
5NDV_PAR_5_3417 71% 70% 0.083 0.9030.16 0.82 - 200100%1
5NDV_PAR_5_3410 71% 67% 0.106 0.9280.16 0.91 - 220100%0.94
5NDV_PAR_1_3428 70% 63% 0.106 0.9250.22 1.01 - 320100%0.91
5NDV_PAR_5_3406 69% 64% 0.107 0.9230.27 0.93 - 530100%0.85
5NDV_PAR_5_3407 67% 68% 0.109 0.9180.21 0.84 - 320100%0.87
5NDV_PAR_1_3411 66% 43% 0.11 0.9170.32 1.74 - 560100%0.97
5NDV_PAR_1_3421 66% 65% 0.127 0.9350.22 0.96 - 240100%0.83
5NDV_PAR_1_3409 65% 49% 0.118 0.920.29 1.53 - 510100%0.86
5NDV_PAR_1_3425 63% 57% 0.128 0.9250.26 1.21 - 580100%0.83
5NDV_PAR_5_3420 62% 56% 0.12 0.9130.23 1.27 - 6110100%1
5NDV_PAR_2_1902 62% 53% 0.104 0.8950.24 1.38 - 630100%0.98
5NDV_PAR_1_3402 62% 71% 0.107 0.8980.2 0.76 - 200100%0.81
5NDV_PAR_7_201 61% 72% 0.108 0.8980.17 0.77 - 230100%0.95
5NDV_PAR_1_3415 61% 65% 0.116 0.9050.24 0.92 - 370100%0.83
5NDV_PAR_5_3412 61% 66% 0.119 0.9070.2 0.93 - 220100%0.88
5NDV_PAR_6_1903 60% 67% 0.122 0.9080.17 0.91 - 140100%0.98
5NDV_PAR_5_3414 58% 68% 0.107 0.8860.19 0.85 - 410100%0.87
5NDV_PAR_4_202 58% 60% 0.133 0.9140.25 1.09 - 420100%0.8
5NDV_PAR_5_3421 57% 56% 0.102 0.8760.2 1.31 - 230100%1
5NDV_PAR_5_3416 57% 65% 0.104 0.8770.21 0.95 - 330100%0.95
5NDV_PAR_1_3429 56% 55% 0.133 0.9050.24 1.31 - 410100%0.86
5NDV_PAR_1_3419 56% 59% 0.112 0.8820.22 1.17 - 540100%0.96
5NDV_PAR_1_3418 55% 66% 0.123 0.8920.26 0.88 - 300100%0.83
5NDV_PAR_6_1904 55% 66% 0.136 0.9060.21 0.9 - 2100100%0.93
5NDV_PAR_5_3408 54% 65% 0.14 0.9050.2 0.96 - 340100%0.76
5NDV_PAR_1_3412 52% 58% 0.129 0.8870.21 1.21 - 740100%0.98
5NDV_PAR_1_3414 51% 62% 0.14 0.8960.2 1.09 - 440100%0.8
5NDV_PAR_1_3422 51% 61% 0.167 0.9230.21 1.09 - 320100%0.68
5NDV_PAR_1_3407 51% 64% 0.113 0.8630.21 0.98 - 360100%0.79
5NDV_PAR_5_3419 51% 52% 0.148 0.9010.33 1.34 - 9110100%0.92
5NDV_PAR_2_1904 50% 52% 0.105 0.8520.2 1.48 - 480100%1
5NDV_PAR_3_202 49% 61% 0.151 0.8970.2 1.11 - 320100%0.74
5NDV_PAR_6_1901 49% 64% 0.109 0.8510.24 0.96 - 200100%0.94
5NDV_PAR_1_3434 48% 66% 0.123 0.8660.2 0.92 - 550100%0.84
5NDV_PAR_1_3430 48% 64% 0.132 0.8750.23 0.97 - 310100%0.83
5NDV_PAR_5_3424 47% 63% 0.164 0.9030.18 1.04 - 390100%0.83
5NDV_PAR_5_3415 46% 62% 0.113 0.8470.25 1.04 - 230100%0.97
5NDV_PAR_5_3413 45% 52% 0.162 0.8960.2 1.48 - 7120100%0.86
5NDV_PAR_5_3426 45% 66% 0.154 0.8850.22 0.91 - 130100%0.7
5NDV_PAR_1_3431 44% 59% 0.134 0.8620.19 1.19 - 310100%0.75
5NDV_PAR_7_202 43% 67% 0.155 0.880.16 0.91 - 320100%0.79
5NDV_PAR_5_3402 42% 62% 0.114 0.8290.19 1.1 - 230100%0.82
5NDV_PAR_1_3406 42% 66% 0.139 0.8560.2 0.92 - 420100%0.79
5NDV_PAR_1_3427 42% 67% 0.163 0.8820.21 0.87 - 320100%0.73
5NDV_PAR_5_3401 41% 61% 0.153 0.8680.26 1.04 - 240100%0.81
5NDV_PAR_6_1905 40% 61% 0.116 0.8250.19 1.11 - 400100%1
5NDV_PAR_3_203 40% 62% 0.141 0.8510.21 1.05 - 3100100%0.9
5NDV_PAR_1_3436 40% 62% 0.126 0.8330.22 1.05 - 300100%0.92
5NDV_PAR_5_3418 39% 60% 0.116 0.8210.23 1.12 - 360100%0.95
5NDV_PAR_5_3409 39% 63% 0.184 0.8930.22 1.02 - 490100%0.82
5NDV_PAR_n3_201 39% 60% 0.162 0.8690.24 1.11 - 490100%0.66
5NDV_PAR_1_3417 39% 67% 0.166 0.8720.17 0.91 - 230100%0.81
5NDV_PAR_1_3432 38% 58% 0.177 0.880.25 1.16 - 260100%0.72
5NDV_PAR_2_1905 37% 69% 0.162 0.8590.2 0.82 - 480100%0.76
5NDV_PAR_1_3426 37% 62% 0.152 0.8480.25 1.04 - 340100%0.92
5NDV_PAR_1_3437 36% 72% 0.194 0.8910.18 0.75 - 230100%0.65
5NDV_PAR_5_3422 34% 65% 0.111 0.7930.19 0.95 - 420100%0.92
5NDV_PAR_1_3401 34% 58% 0.109 0.7880.16 1.28 - 330100%0.85
5NDV_PAR_5_3428 33% 53% 0.124 0.80.39 1.25 - 6100100%0.9
5NDV_PAR_5_3425 32% 63% 0.197 0.8740.2 1.03 - 420100%0.76
5NDV_PAR_5_3427 31% 60% 0.163 0.8350.22 1.11 - 340100%0.81
5NDV_PAR_8_201 30% 62% 0.158 0.8250.23 1.05 - 500100%0.82
5NDV_PAR_1_3405 30% 65% 0.19 0.8590.24 0.93 - 330100%0.7
5NDV_PAR_1_3404 30% 65% 0.223 0.8940.22 0.96 - 220100%0.63
5NDV_PAR_2_1901 29% 72% 0.175 0.8350.19 0.75 - 220100%0.78
5NDV_PAR_8_202 28% 66% 0.223 0.8850.22 0.92 - 120100%0.68
5NDV_PAR_o2_201 28% 57% 0.238 0.8990.28 1.21 - 440100%0.57
5NDV_PAR_5_3404 28% 56% 0.16 0.8120.24 1.26 - 450100%0.94
5NDV_PAR_1_3410 27% 50% 0.189 0.8390.34 1.46 - 850100%0.79
5NDV_PAR_5_3411 26% 59% 0.165 0.8110.23 1.15 - 640100%0.93
5NDV_PAR_1_3413 24% 74% 0.175 0.8080.19 0.68 - 130100%0.76
5NDV_PAR_1_3433 24% 55% 0.146 0.7740.26 1.28 - 790100%0.74
5NDV_PAR_4_201 23% 57% 0.235 0.8660.28 1.21 - 440100%0.62
5NDV_PAR_6_1906 22% 71% 0.135 0.7530.19 0.78 - 280100%0.91
5NDV_PAR_5_3403 21% 62% 0.178 0.7910.24 1.04 - 390100%0.7
5NDV_PAR_1_3435 20% 51% 0.235 0.8440.36 1.36 - 4240100%0.63
5NDV_PAR_1_3403 19% 65% 0.257 0.860.22 0.95 - 210100%0.64
5NDV_PAR_6_1902 18% 62% 0.201 0.7970.23 1.03 - 3100100%0.77
5NDV_PAR_5_3405 18% 68% 0.115 0.6970.21 0.83 - 240100%0.97
5NDV_PAR_5_3423 17% 63% 0.258 0.8470.22 1 - 560100%0.75
5NDV_PAR_3_201 13% 50% 0.174 0.720.26 1.53 - 590100%0.87
7CS0_PAR_A_301 100% 59% 0.036 0.9910.44 0.98 - 510100%1
4TUB_PAR_XA_1710 95% 31% 0.071 0.9861.42 1.24 6 420100%1
4ZC7_PAR_C_101 95% 7% 0.071 0.9863.59 1.33 8 1150100%1
5EL6_PAR_1G_1681 91% 33% 0.065 0.9590.78 1.74 1 1120100%1
4DR4_PAR_A_1604 90% 25% 0.08 0.9711.32 1.63 6 1230100%1