Ligand validation:5NDF

EDO: 1,2-ETHANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5NDF_EDO_D_603	58%	68%	0.102	0.878	1.08	0.04	-	-	1	0	100%	1
5NDF_EDO_A_606	51%	78%	0.106	0.857	0.66	0.17	-	-	0	0	100%	1
5NDF_EDO_A_605	39%	69%	0.128	0.832	0.79	0.27	-	-	1	0	100%	1
5NDF_EDO_B_603	34%	81%	0.129	0.812	0.23	0.52	-	-	0	0	100%	1
5NDF_EDO_E_603	25%	77%	0.149	0.785	0.73	0.13	-	-	0	0	100%	1
5NDF_EDO_A_607	24%	80%	0.146	0.774	0.43	0.35	-	-	0	0	100%	1
5NDF_EDO_A_603	23%	31%	0.211	0.841	1.38	1.29	-	-	2	0	100%	1
5NDF_EDO_F_603	21%	81%	0.17	0.781	0.49	0.28	-	-	1	0	100%	1
5NDF_EDO_A_604	11%	63%	0.182	0.71	1.03	0.29	-	-	0	0	100%	1
5NDF_EDO_C_603	5%	82%	0.198	0.62	0.53	0.23	-	-	0	0	100%	1
5AJN_EDO_A_1581	98%	70%	0.051	0.981	0.37	0.63	-	-	2	0	100%	1
4D0T_EDO_C_1573	96%	83%	0.054	0.974	0.47	0.27	-	-	0	0	100%	1
4D0Z_EDO_E_1579	92%	69%	0.067	0.964	0.43	0.6	-	-	2	0	100%	1
5FV9_EDO_E_1576	82%	74%	0.089	0.948	0.21	0.68	-	-	0	0	100%	1
4Q6J_EDO_A_302	100%	79%	0.013	0.999	0.37	0.42	-	-	0	0	100%	1
5BV2_EDO_P_811	100%	81%	0.013	0.998	0.34	0.41	-	-	0	0	100%	1
5MZ2_EDO_B_903	100%	83%	0.012	0.998	0.49	0.24	-	-	0	0	100%	1
3QNB_EDO_B_1	100%	64%	0.016	0.998	0.45	0.76	-	-	2	0	100%	1
3UXJ_EDO_B_291	100%	65%	0.017	0.998	0.66	0.55	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.