6Y2: ~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-acetamido-2-(hydroxymethyl)-6-(4-nitrophenoxy)-4-oxidanyl-oxan-3-yl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide
6Y2 is a Ligand Of Interest in 5KXD designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5KXD_6Y2_B_305 | 76% | 22% | 0.104 | 0.94 | 2.23 | 1.18 | 2 | 3 | 0 | 0 | 100% | 1 |
5KXD_6Y2_D_307 | 73% | 13% | 0.119 | 0.945 | 2.97 | 1.17 | 5 | 5 | 0 | 0 | 100% | 1 |
5KXD_6Y2_C_312 | 35% | 14% | 0.189 | 0.875 | 3.05 | 1.08 | 6 | 3 | 0 | 0 | 100% | 1 |
5KXD_6Y2_A_306 | 31% | 17% | 0.2 | 0.869 | 2.68 | 1.1 | 4 | 6 | 0 | 0 | 100% | 1 |
5KXC_6Y2_B_302 | 80% | 23% | 0.088 | 0.937 | 2.14 | 1.23 | 4 | 6 | 0 | 0 | 100% | 1 |
5KXE_6Y2_C_303 | 58% | 17% | 0.148 | 0.926 | 2.56 | 1.22 | 2 | 6 | 0 | 0 | 100% | 1 |