GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 5KSP designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5KSP_GDP_A_701 | 68% | 41% | 0.116 | 0.93 | 0.93 | 1.26 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5KSP_GDP_B_701 | 56% | 41% | 0.151 | 0.924 | 0.93 | 1.24 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5KSO_GDP_A_701 | 84% | 50% | 0.094 | 0.963 | 0.97 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 5KTY_GDP_A_701 | 81% | 48% | 0.118 | 0.975 | 0.98 | 0.93 | 1 | 1 | 1 | 0 | 100% | 1 |
| 5KU1_GDP_A_701 | 75% | 41% | 0.123 | 0.96 | 0.94 | 1.26 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5KSY_GDP_A_701 | 20% | 39% | 0.241 | 0.855 | 0.94 | 1.31 | 1 | 4 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 22% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9C3K_GDP_B_201 | 100% | 38% | 0.014 | 0.998 | 1.15 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8ECR_GDP_A_302 | 100% | 28% | 0.017 | 0.998 | 1.48 | 1.32 | 2 | 4 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 44% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 36% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
