YPG: [3-[(3~{R},4~{R})-3-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-4-[(2~{S})-2-oxidanyl-2-phosphono-ethoxy]pyrrolidin-1-y
l]-3-oxidanylidene-propyl]phosphonic acid
YPG is a Ligand Of Interest in 5KNY designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5KNY_YPG_D_301 | 56% | 11% | 0.154 | 0.925 | 2.93 | 1.49 | 9 | 8 | 1 | 0 | 100% | 0.8981 |
| 5KNY_YPG_B_301 | 54% | 10% | 0.162 | 0.927 | 2.92 | 1.63 | 8 | 8 | 1 | 0 | 100% | 1 |
| 5KNY_YPG_C_301 | 51% | 11% | 0.161 | 0.914 | 2.91 | 1.54 | 8 | 8 | 6 | 0 | 100% | 1 |
| 5KNY_YPG_A_301 | 35% | 10% | 0.208 | 0.897 | 2.94 | 1.57 | 8 | 6 | 2 | 0 | 100% | 0.65 |
| 5HIA_YPG_D_301 | 92% | 10% | 0.079 | 0.971 | 3.1 | 1.43 | 10 | 4 | 0 | 0 | 100% | 1 |
| 6BO7_YPG_K_304 | 70% | 6% | 0.122 | 0.939 | 3.85 | 1.38 | 11 | 4 | 1 | 0 | 100% | 1 |
