SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 5GTI designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5GTI_SQD_A_409 | 77% | 30% | 0.066 | 0.95 | 0.93 | 1.82 | 2 | 12 | 2 | 0 | 100% | 1 |
| 5GTI_SQD_a_411 | 75% | 35% | 0.07 | 0.947 | 0.92 | 1.58 | 2 | 12 | 2 | 0 | 100% | 1 |
| 5GTI_SQD_L_102 | 62% | 36% | 0.073 | 0.896 | 0.97 | 1.5 | 2 | 9 | 5 | 0 | 100% | 1 |
| 5GTI_SQD_a_413 | 57% | 40% | 0.072 | 0.872 | 1.04 | 1.2 | 3 | 7 | 4 | 0 | 100% | 1 |
| 5GTI_SQD_A_411 | 57% | 45% | 0.075 | 0.874 | 0.98 | 1.06 | 2 | 5 | 1 | 0 | 100% | 1 |
| 5GTI_SQD_B_621 | 53% | 37% | 0.085 | 0.875 | 0.99 | 1.43 | 2 | 8 | 2 | 0 | 100% | 1 |
| 5GTI_SQD_D_413 | 44% | 32% | 0.096 | 0.896 | 1.08 | 1.61 | 2 | 11 | 2 | 0 | 80% | 1 |
| 5GTI_SQD_f_101 | 28% | 33% | 0.102 | 0.821 | 1.12 | 1.49 | 2 | 8 | 2 | 0 | 80% | 1 |
| 5V2C_SQD_A_612 | 84% | 23% | 0.062 | 0.972 | 1.04 | 2.08 | 3 | 14 | 2 | 0 | 100% | 1 |
| 5GTH_SQD_A_410 | 76% | 30% | 0.065 | 0.945 | 0.92 | 1.84 | 2 | 12 | 3 | 0 | 100% | 1 |
| 5WS5_SQD_A_410 | 72% | 30% | 0.081 | 0.955 | 0.87 | 1.91 | 2 | 12 | 6 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 71% | 32% | 0.084 | 0.954 | 0.88 | 1.78 | 2 | 12 | 8 | 0 | 100% | 1 |
| 6JLJ_SQD_a_414 | 69% | 36% | 0.081 | 0.944 | 0.92 | 1.56 | 2 | 13 | 2 | 0 | 100% | 1 |














